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book.bib
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%%%%%%%%%%%%R books
@Book{xie2015,
title = {Dynamic Documents with {R} and knitr},
author = {Yihui Xie},
publisher = {Chapman and Hall/CRC},
address = {Boca Raton, Florida},
year = {2015},
edition = {2nd},
note = {ISBN 978-1498716963},
url = {http://yihui.name/knitr/},
}
@Book{Wickham2016,
author = {Hadley Wickham},
title = {ggplot2: Elegant Graphics for Data Analysis},
publisher = {Springer-Verlag New York},
year = {2016},
isbn = {978-3-319-24277-4},
url = {https://ggplot2.tidyverse.org},
}
@Book{Wickham2019,
author={Hadley Wickham},
series= {Chapman & Hall/CRC The R Series},
publisher= {Chapman and Hall/CRC; 2 edition (May 30, 2019)},
year={2019},
edition={2nd},
language= {English},
note= {ISBN-10: 0815384572},
isbn= {978-0815384571}
}
%%%%%%%%books
%Print ISBN:9780471170822 |Online ISBN:9781118625590 |DOI:10.1002/9781118625590
@Book{Draper1998,
title={Applied Regression Analysis, Third Edition},
author={ Norman R. Draper. Harry Smith},
publisher={John Wiley & Sons, Inc},
year={1998},
edition={3rd},
note={ISBN:9780471170822},
series={Wiley Series in Probability and Statistics},
}
@incollection{COHEN1977179,
title = "CHAPTER 6 - Differences between Proportions",
editor = "Jacob Cohen",
booktitle = "Statistical Power Analysis for the Behavioral Sciences",
publisher = "Academic Press",
pages = "179 - 213",
year = "1977",
isbn = "978-0-12-179060-8",
doi = "https://doi.org/10.1016/B978-0-12-179060-8.50011-6",
url = "http://www.sciencedirect.com/science/article/pii/B9780121790608500116",
author = "Jacob Cohen"
}
@inproceedings{Kleinbaum1978AppliedRA,
title={Applied Regression Analysis and Other Multivariable Methods},
author={David G Kleinbaum and Lawrence L. Kupper and Keith E. Muller},
year={1978}
}
@inbook{c38a1e53f6a2457198c204405a3d7e00,
title = "Graph theoretic analysis of human brain networks",
abstract = "The human brain is a highly interconnected network. It is thus suitable for investigation with graph theory, a branch of mathematics concerned with understanding systems of interacting elements. Graph theory has become a popular tool for analyzing human MRI data. In this work, brain networks are modeled as graphs of nodes connected by edges. The nodes represent distinct brain regions and the edges represent some measure of structural or functional interaction between regions. This representation enables the computation of a broad range of metrics that quantify diverse aspects of network organization, thus offering a powerful framework for understanding brain structure and function in both health and disease. This chapter overviews the principles and methods involved in building and analyzing graph theoretic models of the brain using MRI. It explains basic concepts, provides examples of how graph theory has shed new light on brain organization, and considers some limitations of current applications.",
keywords = "connectome, connectivity, graph analysis, network, complexity, MRI, DTI, fMRI",
author = "Alex Fornito",
year = "2016",
month = "9",
day = "1",
doi = "10.1007/978-1-4939-5611-1_10",
language = "English",
isbn = "9781493956098",
volume = "119",
series = "Neuromethods",
publisher = "Humana Press",
number = "119",
pages = "283--314",
editor = "Massimo Filippi",
booktitle = "Neuromethods",
address = "United States of America",
edition = "2nd",
}
@Article{pmid20220526,
Author="Hubbard AE, Ahern J, Fleischer NL, Van der Laan M, Lippman SA, Jewell N, Bruckner T, Satariano WA",
Title="To GEE or Not to GEE: Comparing Population Average and Mixed Models for Estimating the Associations Between Neighborhood Risk Factors and Health",
Journal="Epidemiology",
Year="2010",
Volume="21",
Pages="467--474",
doi="10.1097/EDE.0b013e3181caeb9"
}
@Article{pmid28693043,
Author={VanderWeele TJ, Ding P.},
title={Sensitivity Analysis in Observational Research: Introducing the E-Value.},
Journal="Ann Intern Med",
Year="2017",
month="Aug",
Volume="167",
Pages="268-274",
doi= "10.7326/M16-2607"
}
@Article{pmid29912013,
Author={Mathur MB, Ding P, Riddell CA, VanderWeele TJ.},
title={Web Site and R Package for Computing E-values.},
Journal={Epidemiology},
Year="2018",
month="Sept",
Pages="e45-e47",
doi="10.1097/EDE.0000000000000864"
}
%%%%%%%%%%%%%%%%% my papers
@Article{pmid19660556,
Author="Phan, T. G. and Chen, J. and Donnan, G. and Srikanth, V. and Wood, A. and Reutens, D. C. ",
Title="{{D}evelopment of a new tool to correlate stroke outcome with infarct topography: a proof-of-concept study}",
Journal="Neuroimage",
Year="2010",
Volume="49",
Number="1",
Pages="127--133",
Month="Jan"
}
@Article{pmid16504541,
Author={Phan TG, Donnan GA, Koga M, Mitchell LA, Molan M, Fitt G, Chong W, Holt M, Reutens DC},
Title={The ASPECTS template is weighted in favor of the striatocapsular region.}
},
Journal="Neuroimage",
Year="2006",
Volume="31",
Pages"477-481",
doi={10.1016/j.neuroimage.2005.12.059}
}
@Article{pmid23838753,
Author="Phan, T. G. and Demchuk, A. and Srikanth, V. and Silver, B. and Patel, S. C. and Barber, P. A. and Levine, S. R. and Hill, M. D. ",
Title="{{P}roof of concept study: relating infarct location to stroke disability in the {N}{I}{N}{D}{S} rt-{P}{A} trial}",
Journal="Cerebrovasc. Dis.",
Year="2013",
Volume="35",
Number="6",
Pages="560--565"
}
@Article{pmid31272327,
Author="Phan, T. G. and Krishnadas, N. and Lai, V. W. Y. and Batt, M. and Slater, L. A. and Chandra, R. V. and Srikanth, V. and Ma, H. ",
Title="{{M}eta-{A}nalysis of {A}ccuracy of the {S}pot {S}ign for {P}redicting {H}ematoma {G}rowth and {C}linical {O}utcomes}",
Journal="Stroke",
Year="2019",
Volume="50",
Number="8",
Pages="2030--2036",
Month="08"
}
% 30761063
@Article{pmid30761063,
Author="Phan, T. G. and Kooblal, T. and Matley, C. and Singhal, S. and Clissold, B. and Ly, J. and Thrift, A. G. and Srikanth, V. and Ma, H. ",
Title="{{S}troke {S}everity {V}ersus {D}ysphagia {S}creen as {D}river for {P}ost-stroke {P}neumonia}",
Journal="Front Neurol",
Year="2019",
Volume="10",
Pages="16"
}
% 28579970
@Article{pmid28579970,
Author="Phan, T. G. and Clissold, B. B. and Ma, H. and Ly, J. V. and Srikanth, V. ",
Title="{{P}redicting {D}isability after {I}schemic {S}troke {B}ased on {C}omorbidity {I}ndex and {S}troke {S}everity-{F}rom the {V}irtual {I}nternational {S}troke {T}rials {A}rchive-{A}cute {C}ollaboration}",
Journal="Front Neurol",
Year="2017",
Volume="8",
Pages="192"
}
% 26796056
@Article{pmid26796056,
Author="Phan, T. G. and Clissold, B. and Ly, J. and Ma, H. and Moran, C. and Srikanth, V. and Lees, K. R. and Alexandrov, A. and Bath, P. M. and Bluhmki, E. and Bornstein, N. and Claesson, L. and Davis, S. M. and Donnan, G. and Diener, H. and Fisher, M. and Ginsberg, M. and Gregson, B. and Grotta, J. and Hacke, W. and Hennerici, M. G. and Hommel, M. and Kaste, M. and Lyden, P. and Marler, J. and Muir, K. and Sacco, R. and Shuaib, A. and Teal, P. and Wahlgren, N. G. and Warach, S. and Weimar, C. ",
Title="{{S}troke {S}everity and {C}omorbidity {I}ndex for {P}rediction of {M}ortality after {I}schemic {S}troke from the {V}irtual {I}nternational {S}troke {T}rials {A}rchive-{A}cute {C}ollaboration}",
Journal="J Stroke Cerebrovasc Dis",
Year="2016",
Volume="25",
Number="4",
Pages="835--842",
Month="Apr"
}
% 16504541
@Article{pmid16504541,
Author="Phan, T. G. and Donnan, G. A. and Koga, M. and Mitchell, L. A. and Molan, M. and Fitt, G. and Chong, W. and Holt, M. and Reutens, D. C. ",
Title="{{T}he {A}{S}{P}{E}{C}{T}{S} template is weighted in favor of the striatocapsular region}",
Journal="Neuroimage",
Year="2006",
Volume="31",
Number="2",
Pages="477--481",
Month="Jun"
}
% 15817891
@Article{pmid15817891,
Author="Phan, T. G. and Donnan, G. A. and Wright, P. M. and Reutens, D. C. ",
Title="{{A} digital map of middle cerebral artery infarcts associated with middle cerebral artery trunk and branch occlusion}",
Journal="Stroke",
Year="2005",
Volume="36",
Number="5",
Pages="986--991",
Month="May"
}
@Article{pmid25961856,
Author="Beare, R. and Chen, J. and Phan, T. G. and Lees, R. K. and Ali, M. and Alexandrov, A. and Bath, P. M. and Bluhmki, E. and Bornstein, N. and Claesson, L. and Davis, S. M. and Donnan, G. and Diener, H. and Fisher, M. and Ginsberg, M. and Gregson, B. and Grotta, J. and Hacke, W. and Hennerici, M. G. and Hommel, M. and Kaste, M. and Lyden, P. and Marler, J. and Muir, K. and Sacco, R. and Shuaib, A. and Teal, P. and Wahlgren, N. G. and Warach, S. and Weimar, C. ",
Title="{{G}oogling {S}troke {A}{S}{P}{E}{C}{T}{S} to {D}etermine {D}isability: {E}xploratory {A}nalysis from {V}{I}{S}{T}{A}-{A}cute {C}ollaboration}",
Journal="PLoS ONE",
Year="2015",
Volume="10",
Number="5",
Pages="e0125687"
}
% 26778046
@Article{pmid26778046,
Author="Kempster, P. A. and McLean, C. A. and Phan, T. G. ",
Title="{{T}en year clinical experience with stroke and cerebral vasculitis}",
Journal="J Clin Neurosci",
Year="2016",
Volume="27",
Pages="119--125",
Month="May"
}
@Article{pmid28356438,
Author="Phan, T. G. and Beare, R. and Chen, J. and Clissold, B. and Ly, J. and Singhal, S. and Ma, H. and Srikanth, V. ",
Title="{{G}oogling {S}ervice {B}oundaries for {E}ndovascular {C}lot {R}etrieval {H}ub {H}ospitals in a {M}etropolitan {S}etting: {P}roof-of-{C}oncept {S}tudy}",
Journal="Stroke",
Year="2017",
Volume="48",
Number="5",
Pages="1353--1361",
Month="05"
}
@Article{pmid15531609,
Author="Fort, G. and Lambert-Lacroix, S. ",
Title="{{C}lassification using partial least squares with penalized logistic regression}",
Journal="Bioinformatics",
Year="2005",
Volume="21",
Number="7",
Pages="1104--1111",
Month="Apr"
}
@Article{pmid10703049,
Author="Friston, K. and Phillips, J. and Chawla, D. and Buchel, C. ",
Title="{{N}onlinear {P}{C}{A}: characterizing interactions between modes of brain activity}",
Journal="Philos. Trans. R. Soc. Lond., B, Biol. Sci.",
Year="2000",
Volume="355",
Number="1393",
Pages="135--146",
Month="Jan"
}
@Article{pmid26017442,
Author="LeCun, Y. and Bengio, Y. and Hinton, G. ",
Title="{{D}eep learning}",
Journal="Nature",
Year="2015",
Volume="521",
Number="7553",
Pages="436--444",
Month="May"
}
@article{pmid15345796,
author = {Timothy John Ingall and William Michael O’Fallon and Kjell Asplund and Lewis Robert Goldfrank and Vicki S. Hertzberg and Thomas Arthur Louis and Teresa J. Hengy Christianson },
title = {Findings From the Reanalysis of the NINDS Tissue Plasminogen Activator for Acute Ischemic Stroke Treatment Trial},
journal = {Stroke},
volume = {35},
number = {10},
pages = {2418-2424},
year = {2004},
doi = {10.1161/01.STR.0000140891.70547.56},
URL = {https://www.ahajournals.org/doi/abs/10.1161/01.STR.0000140891.70547.56},
eprint = {https://www.ahajournals.org/doi/pdf/10.1161/01.STR.0000140891.70547.56}
}
@book{hastie_09_elements-of.statistical-learning,
added-at = {2010-06-03T15:15:09.000+0200},
author = {Hastie, Trevor and Tibshirani, Robert and Friedman, Jerome},
biburl = {https://www.bibsonomy.org/bibtex/200d858c0bd2826d4eb5f39450192d1f5/ukoethe},
edition = 2,
file = {:Books\\HastieTibshiraniFriedman-09-Elements-of-Statistical-Learning-2nd-edition\\hastie_09_elements-of.statistical-learning.pdf:PDF},
interhash = {52d1772f39be836e3b298d37b8c0cfa1},
intrahash = {00d858c0bd2826d4eb5f39450192d1f5},
keywords = {inference mathmatics dataanalysis method clutering statistics},
publisher = {Springer},
timestamp = {2010-06-03T15:15:09.000+0200},
title = {The elements of statistical learning: data mining, inference and prediction},
url = {http://www-stat.stanford.edu/~tibs/ElemStatLearn/},
year = 2009
}
@article{brin98anatomy,
added-at = {2008-05-07T13:33:03.000+0200},
author = {Brin, Sergey and Page, Lawrence},
biburl = {https://www.bibsonomy.org/bibtex/2fc936cec60b1b7ab69f230f14139e8ab/ewomant},
description = {In this paper, we present Google, a prototype of a large-scale search engine which makes heavy use of the structure present in hypertext.},
doi = {10.1016/S0169-7552(98)00110-X},
interhash = {1234ad3633d435ef79d8a7f36dafa0a9},
intrahash = {fc936cec60b1b7ab69f230f14139e8ab},
journal = {Computer Networks and ISDN Systems},
keywords = {information_retrieval web},
month = {April},
number = {1-7},
pages = {107--117},
timestamp = {2008-05-07T13:33:03.000+0200},
title = {{T}he {A}natomy of a {L}arge-{S}cale {H}ypertextual {W}eb {S}earch {E}ngine},
volume = 30,
year = 1998
}
@inproceedings{conf/networking/JamakovicM08,
added-at = {2018-06-26T00:00:00.000+0200},
author = {Jamakovic, A. and Mieghem, Piet Van},
biburl = {https://www.bibsonomy.org/bibtex/2aa306746dee17e8ff1da79107a573c93/dblp},
booktitle = {Networking},
crossref = {conf/networking/2008},
editor = {Das, Amitabha and Pung, Hung Keng and Lee, Francis Bu-Sung and Wong, Lawrence Wai-Choong},
ee = {https://doi.org/10.1007/978-3-540-79549-0_16},
interhash = {216b29e2955a780bd48114b70663831a},
intrahash = {aa306746dee17e8ff1da79107a573c93},
isbn = {978-3-540-79548-3},
keywords = {dblp},
pages = {183-194},
publisher = {Springer},
series = {Lecture Notes in Computer Science},
timestamp = {2019-05-15T12:48:26.000+0200},
title = {On the Robustness of Complex Networks by Using the Algebraic Connectivity.},
url = {http://dblp.uni-trier.de/db/conf/networking/networking2008.html#JamakovicM08},
volume = 4982,
year = 2008
}
@Manual{doi10.1007/978-3-319-65355-6,
title = {Heart Rate Variability Analysis with the R package RHRV},
author = {Leandro Rodriguez-Linares and Xose Vila and Maria Jose Lado and Arturo Mendez and Abraham Otero and Constantino Antonio Garcia},
year = {2017},
doi={ 10.1007/978-3-319-65355-6},
publisher={Springer},
series={Use R!},
url = {https://CRAN.R-project.org/package=RHRV},
ISBNs={978-3-31-965354-9, 978-3-31-965355-6}
}
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Author="Jaeschke, R. and Guyatt, G. H. and Sackett, D. L. ",
Title="{{U}sers' guides to the medical literature. {I}{I}{I}. {H}ow to use an article about a diagnostic test. {B}. {W}hat are the results and will they help me in caring for my patients? {T}he {E}vidence-{B}ased {M}edicine {W}orking {G}roup}",
Journal="JAMA",
Year="1994",
Volume="271",
Number="9",
Pages="703--707",
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}
% 8210827
@Article{pmid8210827,
Author="Moses, L. E. and Shapiro, D. and Littenberg, B. ",
Title="{{C}ombining independent studies of a diagnostic test into a summary {R}{O}{C} curve: data-analytic approaches and some additional considerations}",
Journal="Stat Med",
Year="1993",
Volume="12",
Number="14",
Pages="1293--1316",
Month="Jul"
}
% 16168343
@Article{pmid16168343,
Author="Reitsma, J. B. and Glas, A. S. and Rutjes, A. W. and Scholten, R. J. and Bossuyt, P. M. and Zwinderman, A. H. ",
Title="{{B}ivariate analysis of sensitivity and specificity produces informative summary measures in diagnostic reviews}",
Journal="J Clin Epidemiol",
Year="2005",
Volume="58",
Number="10",
Pages="982--990",
Month="Oct"
}
@Article{pmid7069920,
Author={Harrell FE Jr, Califf RM, Pryor DB, Lee KL, Rosati RA},
Title={Evaluating the yield of medical tests},
Journal={JAMA},
Year="1982",
Month="may",
Volume="247",
Pages="2543-2546"
}
@Article{pmid10474158,
Author={Graf E, Schmoor C, Sauerbrei W, Schumacher M},
Title={Assessment and comparison of prognostic classification schemes for survival data},
Journal={Stat Med},
Year="1999",
Month="Sep",
Volume="18",
Pages="2529-2545",
doi={10.1002/(sici)1097-0258(19990915/30)18:17/18<2529::aid-sim274>3.0.co;2-5}
}
@article{LONGATO2020103496,
title = {A practical perspective on the concordance index for the evaluation and selection of prognostic time-to-event models},
journal = {Journal of Biomedical Informatics},
volume = {108},
pages = {103496},
year = {2020},
issn = {1532-0464},
doi = {https://doi.org/10.1016/j.jbi.2020.103496},
url = {https://www.sciencedirect.com/science/article/pii/S1532046420301246},
author = {Enrico Longato and Martina Vettoretti and Barbara {Di Camillo}}
}
@ARTICLE{2015arXiv151206220G,
author = {{Guo}, Jingyi and {Riebler}, Andrea},
title = "{meta4diag: Bayesian Bivariate Meta-analysis of Diagnostic Test Studies for Routine Practice}",
journal = {arXiv e-prints},
keywords = {Statistics - Applications, Statistics - Methodology},
year = 2015,
month = dec,
eid = {arXiv:1512.06220},
pages = {arXiv:1512.06220},
archivePrefix = {arXiv},
eprint = {1512.06220},
primaryClass = {stat.AP},
adsurl = {https://ui.adsabs.harvard.edu/abs/2015arXiv151206220G},
adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}
% 30577087
@Article{pmid30577087,
Author="Seneviratne, U. and Low, Z. M. and Low, Z. X. and Hehir, A. and Paramaswaran, S. and Foong, M. and Ma, H. and Phan, T. G. ",
Title="{{M}edical health care utilization cost of patients presenting with psychogenic nonepileptic seizures}",
Journal="Epilepsia",
Year="2019",
Volume="60",
Number="2",
Pages="349--357",
Month="02"
}
% 25517348
@Article{pmid25517348,
Author="Berkhemer, O. A. and Fransen, P. S. and Beumer, D. and van den Berg, L. A. and Lingsma, H. F. and Yoo, A. J. and Schonewille, W. J. and Vos, J. A. and Nederkoorn, P. J. and Wermer, M. J. and van Walderveen, M. A. and Staals, J. and Hofmeijer, J. and van Oostayen, J. A. and Lycklama a Nijeholt, G. J. and Boiten, J. and Brouwer, P. A. and Emmer, B. J. and de Bruijn, S. F. and van Dijk, L. C. and Kappelle, L. J. and Lo, R. H. and van Dijk, E. J. and de Vries, J. and de Kort, P. L. and van Rooij, W. J. and van den Berg, J. S. and van Hasselt, B. A. and Aerden, L. A. and Dallinga, R. J. and Visser, M. C. and Bot, J. C. and Vroomen, P. C. and Eshghi, O. and Schreuder, T. H. and Heijboer, R. J. and Keizer, K. and Tielbeek, A. V. and den Hertog, H. M. and Gerrits, D. G. and van den Berg-Vos, R. M. and Karas, G. B. and Steyerberg, E. W. and Flach, H. Z. and Marquering, H. A. and Sprengers, M. E. and Jenniskens, S. F. and Beenen, L. F. and van den Berg, R. and Koudstaal, P. J. and van Zwam, W. H. and Roos, Y. B. and van der Lugt, A. and van Oostenbrugge, R. J. and Majoie, C. B. and Dippel, D. W. and Berkhemer, O. A. and Fransen, P. S. and Beumer, D. and van den Berg, L. A. and Lingsma, H. F. and Yoo, A. J. and Schonewille, W. J. and Vos, J. A. and Nederkoorn, P. J. and Wermer, M. J. and van Walderveen, M. A. and Staals, J. and Hofmeijer, J. and van Oostayen, J. A. and Lycklama a Nijeholt, G. J. and Boiten, J. and Brouwer, P. A. and Emmer, B. J. and de Bruijn, S. F. and van Dijk, L. C. and Kappelle, L. J. and Lo, R. H. and van Dijk, E. J. and de Vries, J. and de Kort, P. L. and van Rooij, W. J. and van den Berg, J. S. and van Hasselt, B. A. and Aerden, L. A. and Dallinga, R. J. and Visser, M. C. and Bot, J. C. and Vroomen, P. C. and Eshghi, O. and Schreuder, T. H. and Heijboer, R. J. and Keizer, K. and Tielbeek, A. V. and den Hertog, H. M. and Gerrits, D. G. and van den Berg-Vos, R. M. and Karas, G. B. and Steyerberg, E. W. and Flach, H. Z. and Marquering, H. A. and Sprengers, M. E. and Jenniskens, S. F. and Beenen, L. F. and van den Berg, R. and Koudstaal, P. J. and van Zwam, W. H. and Roos, Y. B. and van der Lugt, A. and van Oostenbrugge, R. J. and Majoie, C. B. and Dippel, D. W. and Brown, M. M. and Liebig, T. and Stijnen, T. and Andersson, T. and Mattle, H. and Wahlgren, N. and van der Heijden, E. and Ghannouti, N. and Fleitour, N. and Hooijenga, I. and Puppels, C. and Pellikaan, W. and Geerling, A. and Lindl-Velema, A. and van Vemde, G. and Klinieken, I. and de Ridder, A. and Greebe, P. and de Bont-Stikkelbroeck, J. and de Meris, J. and Janssen, K. and Struijk, W. and Licher, S. and Boodt, N. and Ros, A. and Venema, E. and Slokkers, I. and Ganpat, R. J. and Mulder, M. and Saiedie, N. and Heshmatollah, A. and Schipperen, S. and Vinken, S. and van Boxtel, T. and Koets, J. and Boers, M. and Santos, E. and Borst, J. and Jansen, I. and Kappelhof, M. and Lucas, M. and Geuskens, R. and Barros, R. S. and Dobbe, R. and Csizmadia, M. ",
Title="{{A} randomized trial of intraarterial treatment for acute ischemic stroke}",
Journal="N. Engl. J. Med.",
Year="2015",
Volume="372",
Number="1",
Pages="11--20",
Month="Jan"
}
% 25671797
@Article{pmid25671797,
Author="Campbell, B. C. and Mitchell, P. J. and Kleinig, T. J. and Dewey, H. M. and Churilov, L. and Yassi, N. and Yan, B. and Dowling, R. J. and Parsons, M. W. and Oxley, T. J. and Wu, T. Y. and Brooks, M. and Simpson, M. A. and Miteff, F. and Levi, C. R. and Krause, M. and Harrington, T. J. and Faulder, K. C. and Steinfort, B. S. and Priglinger, M. and Ang, T. and Scroop, R. and Barber, P. A. and McGuinness, B. and Wijeratne, T. and Phan, T. G. and Chong, W. and Chandra, R. V. and Bladin, C. F. and Badve, M. and Rice, H. and de Villiers, L. and Ma, H. and Desmond, P. M. and Donnan, G. A. and Davis, S. M. and Davis, S. M. and Donnan, G. A. and Campbell, B. C. and Mitchell, P. J. and Churilov, L. and Campbell, B. C. and Mitchell, P. J. and Davis, S. M. and Yan, B. and Dowling, R. J. and Yassi, N. and Oxley, T. J. and Wu, T. Y. and Silver, G. and McDonald, A. and McCoy, R. and Kleinig, T. J. and Scroop, R. and Dewey, H. M. and Simpson, M. and Brooks, M. and Coulton, B. and Krause, M. and Harrington, T. J. and Steinfort, B. and Faulder, K. and Priglinger, M. and Day, S. and Phan, T. and Chong, W. and Holt, M. and Chandra, R. V. and Ma, H. and Young, D. and Wong, K. and Wijeratne, T. and Tu, H. and Mackay, E. and Celestino, S. and Bladin, C. F. and Loh, P. S. and Gilligan, A. and Ross, Z. and Coote, S. and Frost, T. and Parsons, M. W. and Miteff, F. and Levi, C. R. and Ang, T. and Spratt, N. and Kaauwai, L. and Badve, M. and Rice, H. and de Villiers, L. and Barber, P. A. and McGuinness, B. and Hope, A. and Moriarty, M. and Bennett, P. and Wong, A. and Coulthard, A. and Lee, A. and Jannes, J. and Field, D. and Campbell, B. C. and Mitchell, P. J. and Sharma, G. and Salinas, S. and Cowley, E. and McCoy, R. and Snow, B. and Kolbe, J. and Stark, R. and King, J. and Macdonnell, R. and Attia, J. and D'Este, C. ",
Title="{{E}ndovascular therapy for ischemic stroke with perfusion-imaging selection}",
Journal="N. Engl. J. Med.",
Year="2015",
Volume="372",
Number="11",
Pages="1009--1018",
Month="Mar"
}
% 1738016
@Article{pmid1738016,
Author="Diamond, G. A. ",
Title="{{W}hat price perfection? {C}alibration and discrimination of clinical prediction models}",
Journal="J Clin Epidemiol",
Year="1992",
Volume="45",
Number="1",
Pages="85--89",
Month="Jan"
}
@Article{pmid8548103,
Author="Friedman, J. H. and Roosen, C. B. ",
Title="{{A}n introduction to multivariate adaptive regression splines}",
Journal="Stat Methods Med Res",
Year="1995",
Volume="4",
Number="3",
Pages="197--217",
Month="Sep"
}
@Article{doi:10.1056/NEJMsr077003,
author = {Wang, Rui and Lagakos, Stephen W. and Ware, James H. and Hunter, David J. and Drazen, Jeffrey M.},
title = {Statistics in Medicine — Reporting of Subgroup Analyses in Clinical Trials},
journal = {New England Journal of Medicine},
volume = {357},
number = {21},
pages = {2189-2194},
year = {2007},
note ={PMID: 18032770},
URL = {https://doi.org/10.1056/NEJMsr077003},
eprint = {https://doi.org/10.1056/NEJMsr077003}
}
@Article{pmid1143310,
Author={Fagan TJ},
Title={Nomogram for Bayes's theorem},
Journal={N Engl J Med},
Year="1975",
Month="Jul",
Volume="293",
Pages="257",
doi={10.1056/NEJM197507312930513}
}
@Article{pmid10700737,
Author={Biggerstaff BJ},
Title={Comparing diagnostic tests: a simple graphic using likelihood ratios},
Journal={Stat Med},
Year="2000",
Month="Mar",
Volume="19",
Pages="649-663",
doi={10.1002/(sici)1097-0258(20000315)19:5<649::aid-sim371>3.0.co;2-h}
}
@Article{pmid33250548,
Author={Muschelli J},
Title={ROC and AUC with a Binary Predictor: a Potentially Misleading Metric},
Journal={J Classif},
Year="2020",
Month="Oct",
Volume="37",
Pages="696-708",
doi={10.1007/s00357-019-09345-1}
}
%%%%%%%%%%%%%%%%%
% 31447755
@Article{pmid31447755,
Author="Phan, T. G. and Beare, R. and Srikanth, V. and Ma, H. ",
Title="{{G}oogling {L}ocation for {O}perating {B}ase of {M}obile {S}troke {U}nit in {M}etropolitan {S}ydney}",
Journal="Front Neurol",
Year="2019",
Volume="10",
Pages="810"
}
% 31333564
@Article{pmid31333564,
Author="Phan, T. G. and Beare, R. and Srikanth, V. and Ma, H. ",
Title="{{G}oogling {S}ervice {B}oundaries for {E}ndovascular {C}lot {R}etrieval ({E}{C}{R}) {H}ub {H}ospitals in {M}etropolitan {S}ydney}",
Journal="Front Neurol",
Year="2019",
Volume="10",
Pages="708"
}
% 31019489
@Article{pmid31019489,
Author="Phan, T. G. and Beare, R. and Parsons, M. and Zhao, H. and Davis, S. and Donnan, G. A. and Srikanth, V. and Ma, H. ",
Title="{{G}oogling {B}oundaries for {O}perating {M}obile {S}troke {U}nit for {S}troke {C}odes}",
Journal="Front Neurol",
Year="2019",
Volume="10",
Pages="331"
}
% 28356438
@Article{pmid28356438,
Author={Phan, T. G. and Beare, R. and Chen, J. and Clissold, B. and Ly, J. and Singhal, S. and Ma, H. and Srikanth, V. },
Title="{{G}oogling {S}ervice {B}oundaries for {E}ndovascular {C}lot {R}etrieval {H}ub {H}ospitals in a {M}etropolitan {S}etting: {P}roof-of-{C}oncept {S}tudy}",
Journal="Stroke",
Year="2017",
Volume="48",
Number="5",
Pages="1353--1361",
Month="05"
}
% 30761063
@Article{pmid30761063,
Author={Phan, T. G. and Kooblal, T. and Matley, C. and Singhal, S. and Clissold, B. and Ly, J. and Thrift, A. G. and Srikanth, V. and Ma, H. },
Title="{{S}troke {S}everity {V}ersus {D}ysphagia {S}creen as {D}river for {P}ost-stroke {P}neumonia}",
Journal="Front Neurol",
Year="2019",
Volume="10",
Pages="16"
}
% 29559951
@Article{pmid29559951,
Author={Phan, T. G. and Chen, J. and Singhal, S. and Ma, H. and Clissold, B. B. and Ly, J. and Beare, R. },
Title="{{E}xploratory {U}se of {D}ecision {T}ree {A}nalysis in {C}lassification of {O}utcome in {H}ypoxic-{I}schemic {B}rain {I}njury}",
Journal="Front Neurol",
Year="2018",
Volume="9",
Pages="126"
}
% 28293215
@Article{pmid28293215,
Author={Phan, T. G. and Chen, J. and Beare, R. and Ma, H. and Clissold, B. and Van Ly, J. and Srikanth, V. and Hanley, D. F. and Butcher, K. and Gregson, B. and Davis, S. and Lees, K. R. and Lyden, P. and Mayer, S. and Muir, K. and Steiner, T. },
Title="{{C}lassification of {D}ifferent {D}egrees of {D}isability {F}ollowing {I}ntracerebral {H}emorrhage: {A} {D}ecision {T}ree {A}nalysis from {V}{I}{S}{T}{A}-{I}{C}{H} {C}ollaboration}",
Journal="Front Neurol",
Year="2017",
Volume="8",
Pages="64"
}
% 31272327
@Article{pmid31272327,
Author={Phan, T. G. and Krishnadas, N. and Lai, V. W. Y. and Batt, M. and Slater, L. A. and Chandra, R. V. and Srikanth, V. and Ma, H. },
Title="{{M}eta-{A}nalysis of {A}ccuracy of the {S}pot {S}ign for {P}redicting {H}ematoma {G}rowth and {C}linical {O}utcomes}",
Journal="Stroke",
Year="2019",
Volume="50",
Number="8",
Pages="2030--2036",
Month="08"
}
% 16931782
@Article{pmid16931782,
Author="Phan, T. G. and Donnan, G. A. and Davis, S. M. and Byrnes, G. ",
Title="{{P}roof-of-principle phase {I}{I} {M}{R}{I} studies in stroke: sample size estimates from dichotomous and continuous data}",
Journal="Stroke",
Year="2006",
Volume="37",
Number="10",
Pages="2521--2525",
Month="Oct"
}
% 22551679
@article{pmid22551679,
title = {Application of principal component analysis to study topography of hypoxic–ischemic brain injury},
journal = {NeuroImage},
volume = {62},
number = {1},
pages = {300-306},
year = {2012},
issn = {1053-8119},
doi = {https://doi.org/10.1016/j.neuroimage.2012.04.025},
url = {https://www.sciencedirect.com/science/article/pii/S1053811912004211},
author = {Shaloo Singhal and Jian Chen and Richard Beare and Henry Ma and John Ly and Thanh G. Phan},
keywords = {Cardiac arrest, Hypoxic ischemic encephalopathy, Atlas, Principal component analysis},
abstract = {The regions at risk of ischemia following cardio-respiratory arrest have not been systematically analysed. This knowledge may be of use in determining the mechanism of ischemic injury at vulnerable sites. The aim of this study is to evaluate the use of principal component analysis to analyse the covariance patterns of hypoxic ischemic injury. The inclusion criteria were: age≥17years, cardio-respiratory arrest and coma on admission (2003–2011). Regions of ischemic injury were manually segmented on fluid attenuated inversion recovery (FLAIR) and diffusion weighted (DWI) sequences and linearly registered into common stereotaxic coordinate space. Topography of ischemic injury was assessed using principal component analysis (covariance data) and compared qualitatively against current method of topography analysis, the probabilistic method (frequency data). For the probabilistic data, subgroup analyses were performed using t-statistics while for the covariance data, subgroup analyses were performed by calculating the angle between the principle components. To account for bias due to a higher frequency of coma survivors in the studied group, we performed sensitivity analysis by sequentially removing coma survivors such that the final data set contained higher rate of death. Quantitative analysis between these methods could not be performed as they have different units of measurement. Forty one patients were included in this series (mean age±SD=51.5±18.9years). In our probabilistic map, the highest frequency of ischemic injury on the DWI and FLAIR sequences was putamen (0.250), caudate (0.225), temporal lobes (0.175), occipital (0.150) and hippocampus (0.125). The first 6 principal components contained 77.7% of the variance of the data. The first component showed covariance between the deep grey matter nuclei and posterior cortical structures (contains 50.2% of the variance of the data). There was similarity in the findings of the subgroup analyses by the downtime whether it was assessed by t-statistics for probabilistic data or angle between the principal components for the covariance data. The sensitivity analysis showed that the pattern of ischemic injury did not change when the analysis was restricted to patients who died. In conclusion, PCA method has many advantages over probabilistic method. In the context of this dataset, PCA showed covariance between deep grey matter nuclei and the posterior cortical structures whereas the probabilistic map provided complementary information on the frequency of occurrence at these locations.}
}
%%%%%%%%%%%%%%%%%%%%%%%%
@article{doi:10.1080/00031305.1998.10480550,
author = { Alan Agresti and Brent A. Coull },
title = {Approximate is Better than “Exact” for Interval Estimation of Binomial Proportions},
journal = {The American Statistician},
volume = {52},
number = {2},
pages = {119-126},
year = {1998},
publisher = {Taylor & Francis},
doi = {10.1080/00031305.1998.10480550},
URL = {
https://doi.org/10.1080/00031305.1998.10480550
},
eprint = {
https://doi.org/10.1080/00031305.1998.10480550
}
}
@article{brown2001,
author = {Brown, Lawrence D. and Cai, T. Tony and DasGupta, Anirban},
doi = "10.1214/ss/1009213286",
fjournal = "Statistical Science",
journal = "Statist. Sci.",
month = "05",
number = "2",
pages = "101--133",
publisher = "The Institute of Mathematical Statistics",
title = "Interval Estimation for a Binomial Proportion",
url = "https://doi.org/10.1214/ss/1009213286",
volume = "16",
year = "2001"
}
% 31593277
@Article{pmid31593277,
Author={Aboumatar, H. and Wise, R. A. },
Title="{{N}otice of {R}etraction. {A}boumatar et al. {E}ffect of a {P}rogram {C}ombining {T}ransitional {C}are and {L}ong-term {S}elf-management {S}upport on {O}utcomes of {H}ospitalized {P}atients {W}ith {C}hronic {O}bstructive {P}ulmonary {D}isease: {A} {R}andomized {C}linical {T}rial. {J}{A}{M}{A}. 2018;320(22):2335-2343}",
Journal="JAMA",
Year="2019",
Volume="322",
Number="14",
Pages="1417--1418",
Month="10"
}
% 31593271
@Article{pmid31593271,
Author={Aboumatar, H. and Naqibuddin, M. and Chung, S. and Chaudhry, H. and Kim, S. W. and Saunders, J. and Bone, L. and Gurses, A. P. and Knowlton, A. and Pronovost, P. and Putcha, N. and Rand, C. and Roter, D. and Sylvester, C. and Thompson, C. and Wolff, J. L. and Hibbard, J. and Wise, R. A. },
Title="{{E}ffect of a {H}ospital-{I}nitiated {P}rogram {C}ombining {T}ransitional {C}are and {L}ong-term {S}elf-management {S}upport on {O}utcomes of {P}atients {H}ospitalized {W}ith {C}hronic {O}bstructive {P}ulmonary {D}isease: {A} {R}andomized {C}linical {T}rial}",
Journal="JAMA",
Year="2019",
Volume="322",
Number="14",
Pages="1371--1380",
Month="10"
}
% 8210827
@Article{pmid8210827,
Author="Moses, L. E. and Shapiro, D. and Littenberg, B. ",
Title="{{C}ombining independent studies of a diagnostic test into a summary {R}{O}{C} curve: data-analytic approaches and some additional considerations}",
Journal="Stat Med",
Year="1993",
Volume="12",
Number="14",
Pages="1293--1316",
Month="Jul"
}
% 28968879
@Article{pmid28968879,
Author={Durif, G. and Modolo, L. and Michaelsson, J. and Mold, J. E. and Lambert-Lacroix, S. and Picard, F. },
Title="{{H}igh dimensional classification with combined adaptive sparse {P}{L}{S} and logistic regression}",
Journal="Bioinformatics",
Year="2018",
Volume="34",
Number="3",
Pages="485--493",
Month="02"
}
%%%%%%%%%%%%%%%%%%%clinical trials
@Article{pmid10356018,
Author={Smeeth, L. Haines, A. Ebrahim, S.},
Title="{Numbers needed to treat derived from meta-analyses--sometimes informative, usually misleading}",
Journal="BMJ",
Year="1999",
Volume="318",
Pages="1548--1551",
doi= {10.1136/bmj.318.7197.1548},
}
@Article{pmid12614141,
Author = {Marx, Arthur. Bucher, Heiner C},
title = {Numbers needed to treat derived from meta-analysis: a word of caution},
volume = "8",
number = "2",
pages = "36--37",
year = "2003",
doi = {10.1136/ebm.8.2.36},
publisher = {Royal Society of Medicine},
issn = {1356-5524},
URL = {https://ebm.bmj.com/content/8/2/36},
eprint = {https://ebm.bmj.com/content/8/2/36.full.pdf},
journal = "BMJ Evidence-Based Medicine"
}
@article{10.1093/biomet/81.3.515,
author = {Grambsch, P. M. and Therneau, T. M.},
title = "{Proportional hazards tests and diagnostics based on weighted residuals}",
journal = {Biometrika},
volume = {81},
number = {3},
pages = {515-526},
year = {1994},
month = {09},
abstract = "{Nonproportional hazards can often be expressed by extending the Cox model to include time varying coefficients; e.g., for a single covariate, the hazard function for subject i is modelled as exp \\{β(t)Zi(t)\\}. A common example is a treatment effect that decreases with time. We show that the function βi(t) can be directly visualized by smoothing an appropriate residual plot. Also, many tests of proportional hazards, including those of Cox (1972), Gill \\& Schumacher (1987), Harrell (1986), Lin (1991), Moreau, O'Quigley \\& Mesbah (1985), Nagelkerke, Oosting \\& Hart (1984), O'Quigley \\& Pessione (1989), Schoenfeld (1980) and Wei (1984) are related to time-weighted score tests of the proportional hazards hypothesis, and can be visualized as a weighted least-squares line fitted to the residual plot.}",
issn = {0006-3444},
doi = {10.1093/biomet/81.3.515},
url = {https://doi.org/10.1093/biomet/81.3.515},
eprint = {https://academic.oup.com/biomet/article-pdf/81/3/515/714158/81-3-515.pdf},
}
% 32167523
@Article{pmid32167523,
Author={Stensrud, M. J. and Hernan, M. A. },
Title="{{W}hy {T}est for {P}roportional {H}azards?}",
Journal="JAMA",
Year="2020",
Month="Mar"
}
% 26080342
@Article{pmid26080342,
Author={Kaji, A. H. and Lewis, R. J. },
Title="{{N}oninferiority {T}rials: {I}s a {N}ew {T}reatment {A}lmost as {E}ffective as {A}nother?}",
Journal="JAMA",
Year="2015",
Volume="313",
Number="23",
Pages="2371--2372",
Month="Jun"
}
% 25781447
@Article{pmid25781447,
Author={Gopal, A. D. and Desai, N. R. and Tse, T. and Ross, J. S. },
Title="{{R}eporting of noninferiority trials in {C}linical{T}rials.gov and corresponding publications}",
Journal="JAMA",
Year="2015",
Volume="313",
Number="11",
Pages="1163--1165",
Month="Mar"
}
@Article{doi10.1001/jamaneurol.2020.0678,
author = {Signori, Alessio and Pellegrini, Fabio and Bovis, Francesca and Carmisciano, Luca and de Moor, Carl and Sormani, Maria Pia},
title = "{Comparison of Placebos and Propensity Score Adjustment in Multiple Sclerosis Nonrandomized Studies}",
journal = {JAMA Neurology},
year = {2020},
month = {04},
abstract = "{In the last decade, methods based on propensity scores (PSs) have been frequently used in multiple sclerosis (MS) studies comparing disease-modifying treatments in nonrandomized observational settings. Propensity score adjustment was applied even in situations when all the necessary conditions for its applicability were not satisfied. The PS adjustment can reduce the intrinsic selection bias of nonrandomized studies only if all the confounders are measurable and are at least minimally overlapped between the treatment groups. Sometimes the calendar period or the geographical region of study conduction can be completely nonoverlapping between the compared groups. In such cases, in the causal inference jargon, the positivity assumption, requiring that the probability to receive any of the treatments in all the PS strata is higher than 0, is violated. We will show, with a practical example, the extent of failure of PS adjustment when the positivity assumption is violated.}",
issn = {2168-6149},
doi = {10.1001/jamaneurol.2020.0678},
url = {https://doi.org/10.1001/jamaneurol.2020.0678},
eprint = {https://jamanetwork.com/journals/jamaneurology/articlepdf/2764338/jamaneurology\_signori\_2020\_ld\_200003.pdf},
}
@Article{pmid32404155,
Author={Ludwig, L. and Darmon, P. and Guerci, B},
title="{Computing and interpreting the Number Needed to Treat for Cardiovascular Outcomes Trials:Perspective on GLP-1 RA and SGLT-2i therapies}",
journal={Cardiovasc Diabetol},
year={2020},
month={05},
doi={10.1186/s12933-020-01034-3},
url={https://doi.org/10.1186/s12933-020-01034-3}
}
@Article{pmid25524443,
Author={Wan, X., Wang, W., Liu, J},
title={Estimating the sample mean and standard deviation from the sample size, median, range and/or interquartile range},
journal={BMC Med Res Methodol},
year={2014},
month={12},
doi={https://doi.org/10.1186/1471-2288-14-135},
url={https://doi.org/10.1186/1471-2288-14-135}
}
@Article{pmid37161735,
author = {Jiandong Shi and Dehui Luo and Xiang Wan and Yue Liu and Jiming Liu and Zhaoxiang Bian and Tiejun Tong},
title ={Detecting the skewness of data from the five-number summary and its application in meta-analysis},
journal = {Statistical Methods in Medical Research},
volume = {32},
number = {7},
pages = {1338-1360},
year = {2023},
doi = {10.1177/09622802231172043},
URL = {https://doi.org/10.1177/09622802231172043},
eprint = {https://doi.org/10.1177/09622802231172043}
}
%estmeansd
@Article{doi:10.1177/0962280219889080,
author = {Sean McGrath and XiaoFei Zhao and Russell Steele and Brett D. Thombs and Andrea Benedetti and the DEPRESsion Screening Data (DEPRESSD) Collaboration and Brooke Levis and Kira E. Riehm and Nazanin Saadat and Alexander W. Levis and Marleine Azar and Danielle B. Rice and Ying Sun and Ankur Krishnan and Chen He and Yin Wu and Parash Mani Bhandari and Dipika Neupane and Mahrukh Imran and Jill Boruff and Pim Cuijpers and Simon Gilbody and John P.A. Ioannidis and Lorie A. Kloda and Dean McMillan and Scott B. Patten and Ian Shrier and Roy C. Ziegelstein and Dickens H. Akena and Bruce Arroll and Liat Ayalon and Hamid R. Baradaran and Murray Baron and Anna Beraldi and Charles H. Bombardier and Peter Butterworth and Gregory Carter and Marcos H. Chagas and Juliana C. N. Chan and Rushina Cholera and Neerja Chowdhary and Kerrie Clover and Yeates Conwell and Janneke M. de Man-van Ginkel and Jaime Delgadillo and Jesse R. Fann and Felix H. Fischer and Benjamin Fischler and Daniel Fung and Bizu Gelaye and Felicity Goodyear-Smith and Catherine G. Greeno and Brian J. Hall and Patricia A. Harrison and Martin Harter and Ulrich Hegerl and Leanne Hides and Stevan E. Hobfoll and Marie Hudson and Thomas Hyphantis and Masatoshi Inagaki and Khalida Ismail and Nathalie Jetté and Mohammad E. Khamseh and Kim M. Kiely and Yunxin Kwan and Femke Lamers and Shen-Ing Liu and Manote Lotrakul and Sonia R. Loureiro and Bernd Löwe and Laura Marsh and Anthony McGuire and Sherina Mohd Sidik and Tiago N. Munhoz and Kumiko Muramatsu and Flávia L. Osório and Vikram Patel and Brian W. Pence and Philippe Persoons and Angelo Picardi and Katrin Reuter and Alasdair G. Rooney and Iná S. Santos and Juwita Shaaban and Abbey Sidebottom and Adam Simning and Lesley Stafford and Sharon C. Sung and Pei Lin Lynnette Tan and Alyna Turner and Christina M. van der Feltz-Cornelis and Henk C. van Weert and Paul A. Vöhringer and Jennifer White and Mary A. Whooley and Kirsty Winkley and Mitsuhiko Yamada and Yuying Zhang},
title ={Estimating the sample mean and standard deviation from commonly reported quantiles in meta-analysis},
journal = {Statistical Methods in Medical Research},
volume = {29},
number = {9},
pages = {2520-2537},
year = {2020},
doi = {10.1177/0962280219889080},
note ={PMID: 32292115},
URL = {https://doi.org/10.1177/0962280219889080},
eprint = {https://doi.org/10.1177/0962280219889080}
}
@Article{pmid36412105,
title={Standard error estimation in meta-analysis of studies reporting medians},
author={Sean McGrath and Stephan Katzenschlager and Alexander J. Zimmer and Alexander Seitel and Russell J. Steele and Andrea Benedetti},
journal={Statistical Methods in Medical Research},
year={2022},
volume={32},
pages={373 - 388},
url={https://api.semanticscholar.org/CorpusID:250113352},
doi={10.1177/09622802221139233}
}
@Article{doi:10.1177/0962280216669183,
author = {Dehui Luo and Xiang Wan and Jiming Liu and Tiejun Tong},
title ={Optimally estimating the sample mean from the sample size, median, mid-range, and/or mid-quartile range},
journal = {Statistical Methods in Medical Research},
volume = {27},
number = {6},
pages = {1785-1805},
year = {2018},
doi = {10.1177/0962280216669183},
note ={PMID: 27683581},
URL = {https://doi.org/10.1177/0962280216669183},
eprint = {https://doi.org/10.1177/0962280216669183}
}
%metafor
@article{JSSv036i03,
title={Conducting Meta-Analyses in R with the metafor Package},
volume={36},
url={https://www.jstatsoft.org/index.php/jss/article/view/v036i03},
doi={10.18637/jss.v036.i03},
abstract={The &lt;b&gt;metafor&lt;/b&gt; package provides functions for conducting meta-analyses in &lt;b&gt;R&lt;/b&gt;. The package includes functions for fitting the meta-analytic fixed- and random-effects models and allows for the inclusion of moderators variables (study-level covariates) in these models. Meta-regression analyses with continuous and categorical moderators can be conducted in this way. Functions for the Mantel-Haenszel and Peto’s one-step method for meta-analyses of 2 x 2 table data are also available. Finally, the package provides various plot functions (for example, for forest, funnel, and radial plots) and functions for assessing the model fit, for obtaining case diagnostics, and for tests of publication bias.},
number={3},
journal={Journal of Statistical Software},
author={Viechtbauer, Wolfgang},
year={2010},
pages={1–48}
}
%meta
@Article{doi10.1136/ebmental-2019-300117,
title = {How to perform a meta-analysis with {R}: a practical
tutorial},
author = {Sara Balduzzi and Gerta Rücker and Guido Schwarzer},
journal = {Evidence-Based Mental Health},
year = {2019},
number = {22},
pages = {153--160},
}
@Article{pmid29387889,
Author={Aung T, Halsey J, Kromhout D, Gerstein HC, Marchioli R, Tavazzi L, Geleijnse JM, Rauch B, Ness A, Galan P, Chew EY, Bosch J, Collins R, Lewington S, Armitage J, Clarke R; Omega-3 Treatment Trialists’ Collaboration.},
title={Associations of Omega-3 Fatty Acid Supplement Use With Cardiovascular Disease Risks: Meta-analysis of 10 Trials Involving 77 917 Individuals},
journal={Jama Cardiol},
year={2018},
month={03},
doi={doi: 10.1001/jamacardio.2017.5205},
url={https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5885893/}
}
@Article{pmid31567003,
Author={Hu, Y., Hu, F., Manson, J},
title={Marine Omega‐3 Supplementation and Cardiovascular Disease: An Updated Meta‐Analysis of 13 Randomized Controlled Trials Involving 127 477 Participants},
journal={JAHA},
doi={https://doi.org/10.1161/JAHA.119.013543},
year={2019},
month={09},
url={https://www.ahajournals.org/doi/10.1161/JAHA.119.013543}
}
%%%%%%%%%%%%%% Surgery
% 26080338
@Article{pmid26080338,
Author={Salminen, P. and Paajanen, H. and Rautio, T. and Nordstrom, P. and Aarnio, M. and Rantanen, T. and Tuominen, R. and Hurme, S. and Virtanen, J. and Mecklin, J. P. and Sand, J. and Jartti, A. and Rinta-Kiikka, I. and Grnroos, J. M. },
Title="{{A}ntibiotic {T}herapy vs {A}ppendectomy for {T}reatment of {U}ncomplicated {A}cute {A}ppendicitis: {T}he {A}{P}{P}{A}{C} {R}andomized {C}linical {T}rial}",
Journal="JAMA",
Year="2015",
Volume="313",
Number="23",
Pages="2340--2348",
Month="Jun"
}
@Article{10.1186/1745-6215-15-139,
Author={Kahan, B.C., Jairath, V., Doré, C.J.},
Title={The risks and rewards of covariate adjustment in randomized trials: an assessment of 12 outcomes from 8 studies},
Journal="Trials",
Year="2014",
Volume="15",