From 335854283958838b1213fc3302bcb59fd2a778ad Mon Sep 17 00:00:00 2001 From: Jieran Sun Date: Wed, 14 Feb 2024 13:41:51 +0000 Subject: [PATCH] change access so snakemake can proceed --- method/BANKSY/banksy.yml | 0 method/BANKSY/banksy_env.sh | 0 method/BANKSY/banksy_optargs.json | 0 method/BayesSpace/BayesSpace.yml | 0 method/BayesSpace/BayesSpace_optargs.json | 0 method/DRSC/DRSC.yml | 0 method/DRSC/DRSC_optargs.json | 0 method/DRSC/drsc_env.sh | 0 method/DeepST/DeepST.yml | 0 method/DeepST/DeepST_optargs.json | 0 method/GraphST/GraphST.yml | 0 method/GraphST/GraphST_optargs.json | 0 method/GraphST/method_GraphST.py | 0 method/SC.MEB/SC.MEB.yml | 0 method/SC.MEB/SC.MEB_optargs.json | 0 method/SC.MEB/scmeb_env.sh | 0 method/SCAN-IT/config.json | 0 method/SCAN-IT/method_scanit.py | 0 method/SCAN-IT/scanit.yml | 0 method/SCAN-IT/scanit_optargs.json | 0 method/SEDR/SEDR.yml | 0 method/SEDR/SEDR_optargs.json | 0 method/SOTIP/method_sotip.py | 0 method/SOTIP/sotip.yml | 0 method/SOTIP/sotip_optargs.json | 0 method/STAGATE/STAGATE.yml | 0 method/STAGATE/STAGATE_optargs.json | 0 method/STAGATE/method_STAGATE.py | 0 method/SpaceFlow/method_spaceflow.py | 0 method/SpaceFlow/spaceflow.yml | 0 method/SpaceFlow/spaceflow_optargs.json | 0 method/SpiceMix/README.md | 0 method/SpiceMix/SpiceMix.yml | 0 method/SpiceMix/SpiceMix_optargs.json | 0 method/bass/bass.yml | 0 method/bass/bass_env.sh | 0 method/bass/bass_optargs.json | 0 method/maple/maple.yml | 0 method/maple/maple_env.sh | 0 method/maple/maple_optargs.json | 0 method/meringue/meringue.yml | 0 method/meringue/meringue_env.sh | 0 method/meringue/meringue_optargs.json | 0 method/precast/precast.yml | 0 method/precast/precast_env.sh | 0 method/precast/precast_optargs.json | 0 method/scanpy/method_scanpy.py | 0 method/scanpy/scanpy_env.yaml | 0 method/scanpy/scanpy_optargs.json | 0 method/seurat/seurat.yml | 0 method/seurat/seurat_optargs.json | 0 method/spaGCN/spaGCN.yml | 0 method/spaGCN/spaGCN_optargs.json | 0 method/stardust/stardust.yml | 0 method/stardust/stardust_env.sh | 0 method/stardust/stardust_optargs.json | 0 metric/ARI/ARI.yml | 0 metric/ARI/ARI_optargs.json | 0 metric/CHAOS/CHAOS.r | 0 metric/CHAOS/CHAOS.yml | 0 metric/CHAOS/CHAOS_optargs.json | 0 metric/Calinski-Harabasz/Calinski-Harabasz.py | 0 metric/Calinski-Harabasz/Calinski-Harabasz.yml | 0 metric/Calinski-Harabasz/Calinski-Harabasz_optargs.json | 0 metric/Completeness/Completeness.py | 0 metric/Completeness/Completeness.yml | 0 metric/Completeness/Completeness_optargs.json | 0 metric/Davies-Bouldin/Davies-Bouldin.py | 0 metric/Davies-Bouldin/Davies-Bouldin.yml | 0 metric/Davies-Bouldin/Davies-Bouldin_optargs.json | 0 metric/Entropy/Entropy.py | 0 metric/Entropy/Entropy.yml | 0 metric/Entropy/Entropy_optargs.json | 0 metric/FMI/FMI.py | 0 metric/FMI/FMI.yml | 0 metric/FMI/FMI_optargs.json | 0 metric/Homogeneity/Homogeneity.py | 0 metric/Homogeneity/Homogeneity.yml | 0 metric/Homogeneity/Homogeneity_optargs.json | 0 metric/LISI/LISI.r | 0 metric/LISI/LISI.yml | 0 metric/LISI/LISI_optargs.json | 0 metric/MCC/MCC.py | 0 metric/MCC/MCC.yaml | 0 metric/MCC/MCC_optargs.json | 0 metric/NMI/NMI.yml | 0 metric/NMI/NMI_optargs.json | 0 metric/PAS/PAS.r | 0 metric/PAS/PAS.yml | 0 metric/PAS/PAS_optargs.json | 0 metric/V_measure/V_measure.yml | 0 metric/V_measure/V_measure_optargs.json | 0 .../cluster-specific-silhouette/cluster-specific-silhouette.yml | 0 .../cluster-specific-silhouette_optargs.json | 0 metric/domain-specific-f1/domain-specific-f1.yml | 0 metric/domain-specific-f1/domain-specific-f1_optargs.json | 0 metric/jaccard/jaccard.py | 0 metric/jaccard/jaccard.yaml | 0 metric/jaccard/jaccard_optargs.json | 0 99 files changed, 0 insertions(+), 0 deletions(-) mode change 100644 => 100755 method/BANKSY/banksy.yml mode change 100644 => 100755 method/BANKSY/banksy_env.sh mode change 100644 => 100755 method/BANKSY/banksy_optargs.json mode change 100644 => 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