diff --git a/tests/scripts/test_16.sh b/tests/scripts/test_16.sh index b97b377..921852c 100755 --- a/tests/scripts/test_16.sh +++ b/tests/scripts/test_16.sh @@ -13,4 +13,4 @@ nextflow main.nf -profile conda --name test_data \ --lineage_mode test -s $output/test_data.assembly.pangolin.csv || { echo "Missing pangolin output file (lineage mode with vcf input)!"; exit 1; } -assert_eq `wc -l $output/test_data.assembly.pangolin.csv` 2 "Wrong number of pangolin results" \ No newline at end of file +assert_eq $(wc -l $output/test_data.assembly.pangolin.csv) 2 "Wrong number of pangolin results"