chromosome pair HiC

[yangxiaofeill]

Dear colleagues,
I have finished the HicPro pipeline, and I want to plot the interaction map of different two (or more) chromosomes, e.g. chr1 and chr6. How should I set the parameters since I found the examples are for a single chromosome or whole genome.
Another way is I can extract the matrix files of two chromosomes I want to look at, and then plot in whole-genome style. Is there any better way?

Best