Dockerfile-gmt

FROM badlandsmodel/badlands:latest
MAINTAINER Tristan Salles

# install things
RUN apt-get update -qq && \
    DEBIAN_FRONTEND=noninteractive apt-get install -yq --no-install-recommends \
        cdftools \
        cmake \
        build-essential \
        libcurl4-gnutls-dev \
        libnetcdf-dev \
        gawk \
        gmt-gshhg-full \
        gmt-dcw \
        graphicsmagick \
        ffmpeg \
        xdg-utils \
        gdal-bin \
        libgdal-dev \
        libfftw3-dev \
        libpcre3-dev \
        liblapack-dev \
        libblas-dev \
        libglib2.0-dev \
        ghostscript

# install GMT
RUN wget https://github.com/GenericMappingTools/gmt/releases/download/6.0.0/gmt-6.0.0-src.tar.xz && \
    tar -xvf gmt-6.0.0-src.tar.xz && \
    cd gmt-6.0.0/cmake/; cp ConfigUserTemplate.cmake ../ConfigUser.cmake && \
    dpkg -L gmt-gshhg-full && \
    dpkg -L gmt-dcw

RUN mkdir gmt-6.0.0/build && \
    cd gmt-6.0.0/build && \
    cmake ..

RUN cd gmt-6.0.0/build && \
    cmake --build . && \
    cmake --build . --target install

RUN rm -rf gmt-6.0.0-src.tar.xz && \
    rm -rf gmt-6.0.0

# setup space for working in
VOLUME /live/share
WORKDIR /live

ENV LD_LIBRARY_PATH=/live/lib/:/live/share

EXPOSE 8888
ENV TINI_VERSION v0.18.0
ENTRYPOINT ["/usr/local/bin/tini", "--"]

EXPOSE 9999

# note we use xvfb which to mimic the X display for lavavu
ENTRYPOINT ["/usr/local/bin/xvfbrun.sh"]

# launch notebook
CMD /usr/local/bin/run-jupyter.sh