From 5af8af0e9fcf9d8da434cbad7208e1f81de6a901 Mon Sep 17 00:00:00 2001
From: Lucille Delisle <lucille.delisle@epfl.ch>
Date: Thu, 16 Feb 2023 12:10:26 +0100
Subject: [PATCH] use @TOOL_VERSION@+galaxy@VERSION_SUFFIX@

---
 tools/rgrnastar/macros.xml         | 6 +++---
 tools/rgrnastar/rg_rnaStar.xml     | 2 +-
 tools/rgrnastar/rg_rnaStarSolo.xml | 2 +-
 3 files changed, 5 insertions(+), 5 deletions(-)

diff --git a/tools/rgrnastar/macros.xml b/tools/rgrnastar/macros.xml
index 4291fd48c09..a796425db56 100644
--- a/tools/rgrnastar/macros.xml
+++ b/tools/rgrnastar/macros.xml
@@ -5,8 +5,8 @@
     the index versions in sync, but you should manually adjust the +galaxy
     version number. -->
     <!-- STAR version to be used -->
-    <token name="@VERSION@">2.7.10b</token>
-    <token name="@PROFILE@">21.01</token>
+    <token name="@TOOL_VERSION@">2.7.10b</token>
+    <token name="@VERSION_SUFFIX@">0</token>
     <!-- STAR index version compatible with this version of STAR
     This is the STAR version that introduced the index structure expected
     by the current version.
@@ -19,7 +19,7 @@
 
     <xml name="requirements">
         <requirements>
-            <requirement type="package" version="@VERSION@">star</requirement>
+            <requirement type="package" version="@TOOL_VERSION@">star</requirement>
             <requirement type="package" version="1.16.1">samtools</requirement>
             <requirement type="package" version="1.12">gzip</requirement>
             <yield />
diff --git a/tools/rgrnastar/rg_rnaStar.xml b/tools/rgrnastar/rg_rnaStar.xml
index 0117ce09c2f..616d85d714b 100644
--- a/tools/rgrnastar/rg_rnaStar.xml
+++ b/tools/rgrnastar/rg_rnaStar.xml
@@ -1,4 +1,4 @@
-<tool id="rna_star" name="RNA STAR" version="@VERSION@+galaxy2" profile="@PROFILE@" license="MIT">
+<tool id="rna_star" name="RNA STAR" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@" license="MIT">
     <description>Gapped-read mapper for RNA-seq data</description>
     <macros>
         <import>macros.xml</import>
diff --git a/tools/rgrnastar/rg_rnaStarSolo.xml b/tools/rgrnastar/rg_rnaStarSolo.xml
index 11a437a9731..76b60325267 100644
--- a/tools/rgrnastar/rg_rnaStarSolo.xml
+++ b/tools/rgrnastar/rg_rnaStarSolo.xml
@@ -1,4 +1,4 @@
-<tool id="rna_starsolo" name="RNA STARSolo" version="@VERSION@+galaxy1" profile="@PROFILE@" license="MIT">
+<tool id="rna_starsolo" name="RNA STARSolo" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@" license="MIT">
     <description>mapping, demultiplexing and gene quantification for single cell RNA-seq</description>
     <macros>
         <import>macros.xml</import>