Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Basic image feature extraction #6

Closed
agitter opened this issue Aug 18, 2018 · 1 comment
Closed

Basic image feature extraction #6

agitter opened this issue Aug 18, 2018 · 1 comment

Comments

@agitter
Copy link
Member

agitter commented Aug 18, 2018

As an extension to our neural network feature extraction (#5), we could do a high-throughput HTCondor run to extract basic image properties like:

  • entropy per channel
  • total intensity per channel

Then once we have the clustering in #5, we could see whether any of those are strongly associated with cluster membership. The overall goal is still to identify any obvious image attributes (e.g. empty images) that split the images into the two major clusters.

@agitter
Copy link
Member Author

agitter commented Sep 13, 2018

Recall from https://github.com/xiaohk/pharmaco-image/blob/master/meta_data.ipynb that many of these summary statistics, like intensity, have already been computed.

@agitter agitter closed this as completed Sep 13, 2018
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant