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Hi!
I would like to try ORP on our cluster, but we only have singularity available. I converted the Docker image, and it works to some extent. However using singularity shell orp.sif does not work quite like docker: I have both file systems available and it wants to load conda envs from the host, also $HOME points to the host /home. How would I start this in Singularity so it acts the same as in Docker? singularity exec orp.sif bash has the same problem.
And also to run it on the cluster I would have to start ORP non interactively from a shell script, how would that look?
The text was updated successfully, but these errors were encountered:
Hi!
I would like to try ORP on our cluster, but we only have singularity available. I converted the Docker image, and it works to some extent. However using
singularity shell orp.sif
does not work quite like docker: I have both file systems available and it wants to load conda envs from the host, also$HOME
points to the host/home
. How would I start this in Singularity so it acts the same as in Docker?singularity exec orp.sif bash
has the same problem.And also to run it on the cluster I would have to start ORP non interactively from a shell script, how would that look?
The text was updated successfully, but these errors were encountered: