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Tutorial: long reads analysis #1717

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lescai opened this issue Oct 30, 2024 · 0 comments
Open

Tutorial: long reads analysis #1717

lescai opened this issue Oct 30, 2024 · 0 comments
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enhancement New feature or request

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@lescai
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lescai commented Oct 30, 2024

Description of feature

Topic

Long Reads (nanopore, PacBio) analysis using Sarek

Tasks to realise the tutorial

  1. check whether https://github.com/nf-core/readsimulator can simulate long-reads or identify appropriate alternative
  2. simulate sequence data (max size 100Mb each)
  3. prepare gitpod / codespaces environment and build code
  4. prepare theoretical intro
  5. write down hands-on tutorial
@lescai lescai added the enhancement New feature or request label Oct 30, 2024
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