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openbiodiv-ontology-modified.trig
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openbiodiv-ontology-modified.trig
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## ----Prefix--------------------------------------------------------------
@prefix : <https://openbiodiv.net/> .
@prefix skos: <http://www.w3.org/2004/02/skos/core#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix foaf: <http://xmlns.com/foaf/0.1/> .
@prefix pro: <http://purl.org/spar/pro/> .
@prefix scoro: <http://purl.org/spar/scoro/> .
@prefix ti: <http://www.ontologydesignpatterns.org/cp/owl/timeinterval.owl#> .
@prefix tvc: <http://www.essepuntato.it/2012/04/tvc/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix fabio: <http://purl.org/spar/fabio/> .
@prefix dcelements: <http://purl.org/dc/elements/1.1/> .
@prefix dcterms: <http://purl.org/dc/terms/> .
@prefix frbr: <http://purl.org/vocab/frbr/core#> .
@prefix prism: <http://prismstandard.org/namespaces/basic/2.0/> .
@prefix doco: <http://purl.org/spar/doco/> .
@prefix po: <http://www.essepuntato.it/2008/12/pattern#> .
@prefix co: <http://purl.org/co/> .
@prefix trt: <http://plazi.org/treatment#> .
@prefix c4o: <http://purl.org/spar/c4o/> .
@prefix dwciri: <http://rs.tdwg.org/dwc/iri/> .
@prefix nomen: <http://www.semanticweb.org/dmitriev/ontologies/2013/8/untitled-ontology-6#> .
@prefix dwc: <http://rs.tdwg.org/dwc/terms/> .
@prefix sro: <http://salt.semanticauthoring.org/ontologies/sro#> .
@prefix deo: <http://purl.org/spar/deo/> .
@prefix pext: <http://proton.semanticweb.org/protonue#> .
@prefix ptop: <http://proton.semanticweb.org/protont#> .
@prefix pkm: <http://proton.semanticweb.org/protonkm#> .
@prefix vcard: <http://www.w3.org/2006/vcard/ns#> .
@prefix dbr: <http://dbpedia.org/resource/> .
@prefix org: <http://www.w3.org/ns/org#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix lucene: <http://www.ontotext.com/connectors/lucene#> .
@prefix inst: <http://www.ontotext.com/connectors/lucene/instance#> .
@prefix dbo: <http://dbpedia.org/ontology/> .
@prefix vs: <http://www.w3.org/2003/06/sw-vocab-status/ns#> .
@prefix dwcattributesns: <http://rs.tdwg.org/dwc/terms/attributes/> .
@prefix datacite: <http://purl.org/spar/datacite/> .
## ----Ontology Metadata---------------------------------------------------
: rdf:type owl:Ontology ;
owl:versionInfo "1.0.1" ;
rdfs:comment "You are free to create derivative work as long as you cite the original authors." ;
dcelements:title "The Open Biodiversity Knowledge Management System Ontology" ;
dcelements:subject "Biodiversity Informatics" ;
rdfs:label "OpenBiodiv Ontology" ;
dcelements:creator "Viktor Senderov, Kiril Simov" ;
dcelements:contributor "Mariya Dimitrova" ;
dcelements:license "CC-BY license version 4.0" ;
owl:imports <http://purl.org/spar/fabio/> .
## ------------------------------------------------------------------------
frbr:realization owl:inverseOf frbr:realizationOf.
## ----http://www.essepuntato.it/2008/12/pattern#contains------------------
po:contains rdf:type owl:ObjectProperty ;
owl:inverseOf po:isContainedBy ;
rdfs:domain po:Structured ;
rdfs:comment "A structured element contains another generic element."@en ;
rdfs:label "contains"@en .
## ----http://www.essepuntato.it/2008/12/pattern#isContainedBy-------------
po:isContainedBy rdf:type owl:ObjectProperty ;
rdfs:comment "An element that is contained by another structured element."@en ;
rdfs:label "is contained by"@en .
## ----http://www.essepuntato.it/2008/12/pattern#Structured----------------
po:Structured rdf:type owl:Class ;
rdfs:subClassOf po:Pattern ;
rdfs:comment "The class of elements that can contain other elements."@en ;
rdfs:label "structured element"@en .
## ----http://www.essepuntato.it/2008/12/pattern#Pattern-------------------
po:Pattern rdf:type owl:Class ;
rdfs:subClassOf owl:Thing ;
rdfs:comment "A structural pattern is an atomic component of a document, that is able to capture a recurrent and well known structure of a document. Any entity belonging to this class is compliant with exactly one structural pattern."@en ;
rdfs:label "pattern-based element"@en .
## ----http://proton.semanticweb.org/protonue#Mention----------------------
:Mention rdf:type owl:Class ;
rdfs:seeAlso pext:Mention ;
rdfs:subClassOf deo:DiscourseElement ;
rdfs:comment "An area of a document that can be considered a mention of something."@en ;
rdfs:label "Mention" .
## ------------------------------------------------------------------------
ptop:Statement rdf:type owl:Class ;
rdfs:comment "A message that is stated or declared; a communication (oral or written), setting forth particulars or facts, etc; \"according to his statement he was in London on that day\". WordNet 1.7.1"@en ;
rdfs:label "Statement"@en .
## ----http://xmlns.com/foaf/0.1/Agent-------------------------------------
foaf:Agent rdf:type owl:Class ;
rdfs:comment "An agent (eg. person, group, software or physical artifact)." ;
rdfs:label "Agent" ;
vs:term_status "stable" .
## ----http://proton.semanticweb.org/protonkm#mentions---------------------
:mentions
rdf:type owl:ObjectProperty ;
rdfs:comment "A direct link between an information resource, like a document or a section and an entity." ;
rdfs:domain :Mention ;
rdfs:label "mentions" .
## ----https://openbiodiv.net/contains--------------------------------------
:contains rdf:type owl:ObjectProperty, owl:TransitiveProperty ;
rdfs:label "OpenBiodiv contains" ;
rdfs:subPropertyOf po:contains.
:isContainedBy rdf:type owl:ObjectProperty, owl:TransitiveProperty ;
rdfs:label "OpenBiodiv is contained by" ;
rdfs:subPropertyOf po:isContainedBy.
## ----https://openbiodiv.net/Publisher-------------------------------------
:Publisher rdf:type owl:Class ;
rdfs:label "Publisher"@en ;
rdfs:comment "The publisher of a journal, a type of `foaf:Agent`."@en ;
rdfs:subClassOf foaf:Agent .
## ----https://openbiodiv.net/TaxonomicArticle------------------------------
:TaxonomicArticle rdf:type owl:Class ;
rdfs:subClassOf fabio:JournalArticle ;
rdfs:label "Taxonomic Article"@en .
## ----https://openbiodiv.net/Treatment-------------------------------------
:Treatment a owl:Class ;
rdfs:subClassOf deo:DiscourseElement ,
[ rdf:type owl:Restriction ;
owl:onProperty :isContainedBy ;
owl:someValuesFrom :TaxonomicArticle ] ;
rdfs:label "Taxonomic Treatment"@en ;
rdfs:comment "A rhetorical element of a taxonomic publication, where taxon
circumscription takes place."@en ;
rdfs:comment "Таксономично пояснение или само Пояснение е риторчна част
от таксономичната статия, където се случва описанието
на дадена таксономична концепция."@bg .
## ----https://openbiodiv.net/NomenclatureSection---------------------------
:NomenclatureSection a owl:Class ;
rdfs:subClassOf deo:DiscourseElement,
[ rdf:type owl:Restriction ;
owl:onProperty :isContainedBy ;
owl:someValuesFrom :Treatment ] ;
rdfs:label "Nomenclature Section"@en ;
rdfs:comment "A section of a taxonomic treatment, containing the scientific
name of the taxon described by the treatment, and citations to previous
descriptions, designations of type-genus, and type-species,
and other information."@en .
## ----https://openbiodiv.net/NomenclatureHeading---------------------------
:NomenclatureHeading a owl:Class ;
rdfs:subClassOf deo:DiscourseElement ,
[ rdf:type owl:Restriction ;
owl:onProperty :isContainedBy ;
owl:someValuesFrom :NomenclatureSection ] ;
rdfs:label "Nomenclature Heading"@en ;
rdfs:comment "Inside the taxonomic nomenclature section, we have the treatment
title (name of the taxon)."@en .
## ----https://openbiodiv.net/NomenclatureCitationsList---------------------
:NomenclatureCitationsList a owl:Class ;
rdfs:subClassOf deo:DiscourseElement ,
[ rdf:type owl:Restriction ;
owl:onProperty :isContainedBy ;
owl:someValuesFrom :NomenclatureSection ] ;
rdfs:label "Nomenclature Citations List"@en ;
rdfs:comment "A section in a treatment that includes the citation of one or
several previous treatments of the taxon."@en .
## ----https://openbiodiv.net/BiologySection--------------------------------
:BiologySection a owl:Class ;
rdfs:subClassOf deo:DiscourseElement,
[ rdf:type owl:Restriction ;
owl:onProperty :isContainedBy ;
owl:someValuesFrom :Treatment ] ;
rdfs:label "Biology Section"@en .
## ----https://openbiodiv.net/DescriptionSection----------------------------
:DescriptionSection a owl:Class ;
rdfs:subClassOf deo:DiscourseElement,
[ rdf:type owl:Restriction ;
owl:onProperty :isContainedBy ;
owl:someValuesFrom :Treatment ] ;
rdfs:label "Description Section"@en .
## ----https://openbiodiv.net/DiagnosisSection------------------------------
:DiagnosisSection a owl:Class ;
rdfs:subClassOf deo:DiscourseElement,
[ rdf:type owl:Restriction ;
owl:onProperty :isContainedBy ;
owl:someValuesFrom :Treatment ] ;
rdfs:label "Diagnosis Section"@en .
## ----https://openbiodiv.net/DistributionSection---------------------------
:DistributionSection a owl:Class ;
rdfs:subClassOf deo:DiscourseElement,
[ rdf:type owl:Restriction;
owl:onProperty :isContainedBy;
owl:someValuesFrom :Treatment ];
rdfs:label "Distribution Section"@en.
## ----https://openbiodiv.net/EtymologySection------------------------------
:EtymologySection a owl:Class ;
rdfs:subClassOf deo:DiscourseElement,
[ rdf:type owl:Restriction ;
owl:onProperty :isContainedBy ;
owl:someValuesFrom :Treatment ] ;
rdfs:label "Etymology Section"@en .
## ----https://openbiodiv.net/TaxonomicKey----------------------------------
:TaxonomicKey a owl:Class;
rdfs:subClassOf deo:DiscourseElement,
[ rdf:type owl:Restriction;
owl:onProperty :isContainedBy;
owl:someValuesFrom :TaxonomicArticle ];
rdfs:label "Taxonomic Key"@en.
## ----https://openbiodiv.net/MaterialsExamined-----------------------------
:MaterialsExamined a owl:Class ;
rdfs:subClassOf deo:DiscourseElement ,
[ rdf:type owl:Restriction ;
owl:onProperty :isContainedBy ;
owl:someValuesFrom :Treatment ] ;
rdfs:label "Materials Examined"@en .
## ----https://openbiodiv.net/TaxonomicChecklist----------------------------
:TaxonomicChecklist a owl:Class ;
rdfs:subClassOf deo:DiscourseElement ,
[ rdf:type owl:Restriction ;
owl:onProperty :isContainedBy ;
owl:someValuesFrom :TaxonomicArticle ] ;
rdfs:label "Taxonomic Checklist"@en ;
rdfs:comment "A section in a taxonomic article."@en.
## ----https://openbiodiv.net/TaxonomicNameUsage----------------------------
:TaxonomicNameUsage rdf:type owl:Class ;
rdfs:subClassOf :Mention ;
rdfs:comment "A taxonomic name usage is the mentioning of a taxonomic name
(scientific name, taxonomic concept label, etc.), optionally with
a taxonomic status."@en ;
rdfs:label "Taxonomic Name Usage"@en .
## ----http://rs.tdwg.org/dwc/iri/taxonomicStatus--------------------------
dwciri:taxonomicStatus rdf:type owl:ObjectProperty ;
rdfs:label "taxonomic status"@en ;
rdfs:comment "the IRI version of the DwC term taxonomic status"@en .
## ----https://openbiodiv.net/TaxonomicName---------------------------------
:TaxonomicName rdf:type owl:Class ;
skos:prefLabel "Taxonomic Name"@en ;
skos:altLabel "Biological Name"@en ;
owl:equivalentClass nomen:NOMEN_0000030 .
## ----https://openbiodiv.net/ScientificName--------------------------------
:ScientificName rdf:type owl:Class ;
rdfs:subClassOf :TaxonomicName ;
rdfs:label "Scientific Name"@en ;
owl:equivalentClass nomen:NOMEN_0000036 .
## ----https://openbiodiv.net/LatinName-------------------------------------
:LatinName rdf:type owl:Class ;
rdfs:subClassOf :ScientificName ;
skos:prefLabel "Latinized Scientific Name"@en ;
skos:altLabel "Linnaean Name"@en .
## ----https://openbiodiv.net/TaxonomicConceptLabel-------------------------
:TaxonomicConceptLabel rdf:type owl:Class ;
rdfs:subClassOf :LatinName ;
rdfs:label "Taxon Concept Label"@en ;
rdfs:comment "A taxon concept label is a taxonomic name
usage accompanied by an additional part, consisting of 'sec.' + an identifier
or a literature reference of a work containing the expression of a taxon concept
(treatment)."@en .
## ----https://openbiodiv.net/OTU_Id----------------------------------------
:OTU_Id rdf:type owl:Class ;
rdfs:subClassOf :ScientificName ;
rdfs:label "Operational Taxonomic Unit Identifier"@en ;
rdfs:comment "The identifier of an Operational Taxonomic Unit, such as
BOLD BIN or a Unite SH ID"@en .
## ----https://openbiodiv.net/VernacularName--------------------------------
:VernacularName a owl:Class ;
rdfs:subClassOf :TaxonomicName ;
rdfs:label "Vernacular Name"@en ;
owl:equivalentClass nomen:NOMEN_0000037 .
## ----http://rs.tdwg.org/dwc/iri/nameAccordingTo--------------------------
dwciri:nameAccordingTo rdf:type owl:ObjectProperty ;
rdfs:label "name according to"@en ;
rdfs:comment "the IRI version of dwc:nameAccordingTo"@en .
## ----https://openbiodiv.net/nameAccordingTo-------------------------------
:nameAccordingTo rdf:type owl:ObjectProperty ;
rdfs:subPropertyOf dwciri:nameAccordingTo ;
skos:prefLabel "OpenBiodiv name according to"@en ;
skos:altLabel "sensu"@en ;
rdfs:range frbr:Expression ;
rdfs:domain :TaxonomicConceptLabel ;
rdfs:comment "The reference to the source in which the specific taxonomic
concept circumscription is defined or implied - traditionally signified by
the Latin 'sensu' or 'sec.'' (from secundum, meaning 'according to').
For taxa that are relevantly circumscribed by identifications, a reference
to the keys, monographs, experts and other sources should be given. Should
only be used with IRI's"@en .
## ----https://openbiodiv.net/relatedName-----------------------------------
:relatedName rdf:type owl:ObjectProperty, owl:TransitiveProperty, owl:ReflexiveProperty ;
rdfs:label "has related name"@en ;
rdfs:domain :TaxonomicName ;
rdfs:range :TaxonomicName ;
rdfs:comment "'has related name' is an object property that we
use in order to indicate that two taxonomic names are related somehow. This
relationship is purposely vague as to encompass all situations where two
taxonomic names co-occur in a text. It is transitive and reflexive."@en.
## ----https://openbiodiv.net/replacementName-------------------------------
:replacementName rdf:type owl:ObjectProperty ,
owl:TransitiveProperty ;
rdfs:label "has replacement name"@en ;
rdfs:domain :LatinName ;
rdfs:range :LatinName ;
rdfs:comment "This is a uni-directional property. Its meaning
is that one Linnaean name links to a different Linnaean name via the
usage of this property, then the object name is more accurate and should be
preferred given the information that system currently holds. This property is only
defined for Linnaean names."@en.
## ----http://rs.tdwg.org/dwc/terms/Taxon----------------------------------
<http://rs.tdwg.org/dwc/terms/Taxon> rdf:type owl:Class ;
dcelements:description "Example: The genus Truncorotaloides as published by Brönnimann et al. in 1953 in the Journal of Paleontology Vol. 27(6) p. 817-820."@en ;
dcelements:hasVersion <http://rs.tdwg.org/dwc/terms/history/#Taxon-2014-10-23> ;
dcelements:issued "2008-11-19" ;
dcelements:modified "2014-10-23" ;
dcelements:replaces <http://rs.tdwg.org/dwc/terms/Taxon-2009-09-21> ;
dwcattributesns:abcdEquivalence "no simple equivalent in ABCD" ;
dwcattributesns:decision <http://rs.tdwg.org/dwc/terms/history/decisions/#Decision-2014-10-26_15> ;
dwcattributesns:status "recommended" ;
rdfs:comment "A group of organisms (sensu http://purl.obolibrary.org/obo/OBI_0100026) considered by taxonomists to form a homogeneous unit."@en ;
rdfs:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfs:label "Taxon"@en .
## ----https://openbiodiv.net/OperationalTaxonomicUnit----------------------
:OperationalTaxonomicUnit rdf:type owl:Class ;
rdfs:subClassOf skos:Concept, fabio:Work ;
rdfs:label "Operational Taxonomic Unit"@en ;
rdfs:comment "A superclass for all kinds of taxonomic hypothesis"@en .
## ----https://openbiodiv.net/TaxonomicConcept------------------------------
:TaxonomicConcept rdf:type owl:Class ;
owl:equivalentClass dwc:Taxon ;
rdfs:subClassOf :OperationalTaxonomicUnit ,
[ rdf:type owl:Restriction ;
owl:onProperty :taxonomicConceptLabel ;
owl:minCardinality "1" ] ;
rdfs:comment "A taxonomic concept in the sense of Berendsohn"@en .
## ----http://rs.tdwg.org/dwc/iri/scientificName---------------------------
dwciri:scientificName rdf:type owl:ObjectProperty ;
rdfs:label "has scientific name"@en;
rdfs:comment "the IRI version of dwc:scientificName"@en .
## ----https://openbiodiv.net/taxonomicName---------------------------------
:taxonomicName rdf:type owl:ObjectProperty ;
rdfs:label "has OpenBiodiv taxonomic name"@en ;
rdfs:domain :TaxonomicConcept ;
rdfs:range :TaxonomicName .
## ----https://openbiodiv.net/scientificName--------------------------------
:scientificName rdf:type owl:ObjectProperty ;
rdfs:subPropertyOf :taxonomicName, dwciri:scientificName ;
rdfs:label "has OpeonBiodiv scientific name"@en ;
rdfs:domain :TaxonomicConcept ;
rdfs:range :ScientificName .
## :vernacularName rdf:type owl:ObjectProperty ;
## rdfs:subPropertyOf :taxonomicName ;
## rdfs:label "has OpenBiodiv vernacular name" @en ;
## rdfs:domain :TaxonomicConcept ;
## rdfs:range :VernacularName .
## ----https://openbiodiv.net/taxonomicConceptLabel-------------------------
:taxonomicConceptLabel rdf:type owl:ObjectProperty ;
rdfs:subPropertyOf :scientificName ;
rdfs:label "has taxon concept label"@en ;
rdfs:domain :TaxonomicConcept ;
rdfs:range :TaxonomicConceptLabel .
## ----https://openbiodiv.net/has_OTU_id------------------------------------
:has_OTU_Id rdf:type owl:ObjectProperty ;
rdfs:subPropertyOf :scientificName ;
rdfs:label "has OTU Id"@en ;
rdfs:domain :TaxonomicConcept ;
rdfs:range :OTU_Id .
## ----https://openbiodiv.net/RCC5RelationshipTerms-------------------------
:RCC5Dictionary rdf:type owl:Class ;
rdfs:subClassOf skos:ConceptScheme ,
[ rdf:type owl:Restriction ;
owl:onProperty fabio:isSchemeOf ;
owl:allValuesFrom :RCC5Relation] ;
rdfs:label "Dictionary of RCC5 Relations"@en .
## ----https://openbiodiv.net/RCC5Relation----------------------------------
:RCC5Relation rdf:type owl:Class ;
rdfs:subClassOf skos:Concept ;
rdfs:subClassOf [ rdf:type owl:Restriction ;
owl:onProperty <http://www.w3.org/2004/02/skos/core#inScheme> ;
owl:someValuesFrom :RCC5Dictionary ] ;
rdfs:label "RCC5 Relation"@en ;
rdfs:comment "The of RCC 5 relation, e.g. 'partially overlaps'"@en .
## ----https://openbiodiv.net/RCC5Statement---------------------------------
:RCC5Statement rdf:type owl:Class ;
rdfs:subClassOf ptop:Statement ;
rdfs:label "RCC5 Statement" ;
rdfs:comment "A statement of RCC-5 relationship" .
## ----https://openbiodiv.net/rcc5Property----------------------------------
:rcc5Property rdf:Type owl:ObjectProperty ;
rdfs:domain :RCC5Statement .
## ----https://openbiodiv.net/rcc5fromRegion--------------------------------
:rcc5fromRegion rdf:type owl:ObjectProperty ;
rdfs:subPropertyOf :rcc5Property ;
rdfs:label "from region" ;
rdfs:comment "Connects to the RCC5 statement to the originating region"@en .
## ----https://openbiodiv.net/rcc5toRegion----------------------------------
:rcc5toRegion rdf:type owl:ObjectProperty ;
rdfs:label "to region" ;
rdfs:subPropertyOf :rcc5Property ;
rdfs:comment "Connects to the RCC5 statement to the target region"@en .
## ----https://openbiodiv.net/rcc5RelationType------------------------------
:rcc5RelationType rdf:type owl:ObjectProperty ;
rdfs:label "relation type" ;
rdfs:subPropertyOf :rcc5Property ;
rdfs:range :RCC5Relation ;
rdfs:comment "Connects an RCC-5 statement to the type of RCC-5 relation between the regions."@en .
## ----https://openbiodiv.net/rcc5AccordingTo-------------------------------
:rcc5AccrodingTo rdf:type owl:ObjectProperty ;
rdfs:subPropertyOf :rcc5Property ;
rdfs:label "RCC5 statement according to" ;
rdfs:range frbr:Expression ;
rdfs:comment "In which publication was the statement made"@en .
## ----https://openbiodiv.net/TaxonomicStatusDictionary---------------------
:TaxonomicStatusDictionary rdf:type owl:Class ;
rdfs:subClassOf <http://www.w3.org/2004/02/skos/core#ConceptScheme> ,
[ rdf:type owl:Restriction ;
owl:onProperty fabio:isSchemeOf ;
owl:allValuesFrom :TaxonomicStatus] ;
rdfs:label "Dictionary of Taxonomic Statuses" ;
fabio:hasDiscipline <http://dbpedia.org/page/Taxonomy_(biology)> .
## ----https://openbiodiv.net/TaxonomicStatus-------------------------------
:TaxonomicStatus rdf:type owl:Class ;
rdfs:subClassOf skos:Concept ;
rdfs:subClassOf [ rdf:type owl:Restriction ;
owl:onProperty <http://www.w3.org/2004/02/skos/core#inScheme> ;
owl:someValuesFrom :TaxonomicStatusDictionary ] ;
rdfs:label "Taxonomic Status Term"@en ;
rdfs:comment "The status following a taxonomic name usage in a taxonomic
manuscript, i.e. 'n. sp.',
'comb. new',
'sec. Franz (2017)', etc"@en .
## ----http://rs.tdwg.org/dwc/terms/Occurrence-----------------------------
:Occurrence rdfs:isDefinedBy <http://rs.tdwg.org/dwc/terms/>;
dcterms:isPartOf <http://rs.tdwg.org/dwc/terms/>;
dcterms:created "2009-04-29"^^xsd:date;
dcterms:modified "2014-10-23"^^xsd:date;
dcterms:replaces <http://rs.tdwg.org/dwc/terms/Sample>;
rdfs:label "Occurrence"@en;
skos:prefLabel "Occurrence"@en;
rdfs:comment "An existence of an Organism (sensu http://rs.tdwg.org/dwc/terms/Organism) at a particular place at a particular time."@en;
skos:definition "An existence of an Organism (sensu http://rs.tdwg.org/dwc/terms/Organism) at a particular place at a particular time."@en;
dcterms:description "Examples: A wolf pack on the shore of Kluane Lake in 1988. A virus in a plant leaf in a the New York Botanical Garden at 15:29 on 2014-10-23. A fungus in Central Park in the summer of 1929."@en;
rdf:type rdfs:Class.
## ----http://rs.tdwg.org/dwc/terms/Identification-------------------------
:Identification rdfs:isDefinedBy <http://rs.tdwg.org/dwc/terms/>;
dcterms:isPartOf <http://rs.tdwg.org/dwc/terms/>;
dcterms:created "2008-11-19"^^xsd:date;
dcterms:modified "2014-10-23"^^xsd:date;
rdfs:label "Identification"@en;
skos:prefLabel "Identification"@en;
rdfs:comment "A taxonomic determination (e.g., the assignment to a taxon)."@en;
skos:definition "A taxonomic determination (e.g., the assignment to a taxon)."@en;
dcterms:description "Example: A subspecies determination of an organism."@en;
rdf:type rdfs:Class.
## ----http://rs.tdwg.org/dwc/terms/Event----------------------------------
:Event rdfs:isDefinedBy <http://rs.tdwg.org/dwc/terms/>;
dcterms:isPartOf <http://rs.tdwg.org/dwc/terms/>;
dcterms:created "2009-04-29"^^xsd:date;
dcterms:modified "2014-10-23"^^xsd:date;
dcterms:replaces <http://rs.tdwg.org/dwc/terms/SamplingEvent>;
rdfs:label "Event"@en;
skos:prefLabel "Event"@en;
rdfs:comment "An action that occurs at some location during some time."@en;
skos:definition "An action that occurs at some location during some time."@en;
dcterms:description "Examples: A specimen collection process. A machine observation."@en;
rdf:type rdfs:Class.
## ----http://purl.org/spar/datacite/PersonalIdentifier--------------------
datacite:PersonalIdentifier a owl:Class ;
rdfs:label "personal identifier"@en ;
rdfs:comment "An identifier that uniquely identities an individual person, belonging to a particular identifier scheme such as ORCID specified by an individual within the class datacite:PersonalIdentifierScheme."@en .
## ----http://purl.org/spar/datacite/ResourceIdentifier--------------------
datacite:ResourceIdentifier a owl:Class ;
rdfs:label "resource identifier"@en ;
rdfs:comment "An identifier that is used to uniquely identifies a resource."@en .
## ----http://purl.org/spar/datacite/ResourceIdentifierScheme--------------
datacite:ResourceIdentifierScheme a owl:Class ;
rdfs:label "resource identifier scheme"@en ;
rdfs:comment "The identifier scheme used to identify a resource. Individual schemes are defines as members of this class. For DataCite, the only permitted identifier scheme for the primary resource identifier is the Digital Object Identifier."@en .
## ----http://purl.org/spar/datacite/PersonalIdentifierScheme--------------
datacite:PersonalIdentifierScheme a owl:Class ;
rdfs:label "personal identifier scheme"@en ;
rdfs:comment "The identifier scheme used to identify a person. Individual schemes are defines as members of this class."@en .
## ----http://purl.org/spar/datacite/boldsystems---------------------------
datacite:boldsystems rdf:type datacite:ResourceIdentifierScheme ;
rdfs:label "an identifier scheme"@en ;
rdfs:comment "boldsystems resource identifier scheme."@en .
## ----http://purl.org/spar/datacite/zenodo--------------------------------
datacite:zenodo rdf:type datacite:ResourceIdentifierScheme ;
rdfs:label "an identifier scheme"@en ;
rdfs:comment "zenodo resource identifier scheme."@en .
## ----http://purl.org/spar/datacite/zoobank-------------------------------
datacite:zoobank rdf:type datacite:ResourceIdentifierScheme ;
rdfs:label "an identifier scheme"@en ;
rdfs:comment "zoobank resource identifier scheme."@en .
## ----http://purl.org/spar/datacite/genbank-------------------------------
datacite:genbank rdf:type datacite:ResourceIdentifierScheme ;
rdfs:label "an identifier scheme"@en ;
rdfs:comment "genbank resource identifier scheme."@en .
## ----http://purl.org/spar/datacite/orcid---------------------------------
datacite:orcid rdf:type datacite:PersonalIdentifierScheme,
owl:NamedIndividual ;
rdfs:label "orcid"@en ;
fabio:hasURL "http://orcid.org/"^^xsd:anyURI ;
rdfs:comment "Open Researcher and Contributor Identifier."@en .
## ----https://openbiodiv.net/GenBankAccession------------------------------
:GenBankAccession rdf:type owl:Class ;
rdfs:label "GenBankAccession"@en ;
rdfs:comment "A GenBankAccession."@en ;
## ----https://openbiodiv.net/BOLDRecord------------------------------------
:BOLDRecord rdf:type owl:Class ;
rdfs:label "BOLDRecord"@en ;
rdfs:comment "A BOLDRecord"@en ;
## ----https://openbiodiv.net/BOLDBin---------------------------------------
:BOLDBin rdf:type owl:Class ;
rdfs:label "BOLDBin"@en ;
rdfs:comment "A BOLDBin"@en ;
## ----https://openbiodiv.net/LitCitation-----------------------------------
:LitCitation rdf:type owl:Class ;
rdfs:label "LitCitation"@en ;
rdfs:comment "Inside class"@en ;
## ----https://openbiodiv.net/Checklist-------------------------------------
:Checklist rdf:type owl:Class ;
rdfs:label "Checklist"@en ;
rdfs:comment "A checklist, usually contained in the treatment section "@en ;
## ----https://openbiodiv.net/NomenclatureCitation--------------------------
:NomenclatureCitation rdf:type owl:Class ;
rdfs:label "NomenclatureCitation"@en ;
rdfs:comment "A nomenclature citation; contained in the nomenclature citation list section "@en ;
## ----https://openbiodiv.net/Institution-----------------------------------
:Institution rdf:type owl:Class ;
rdfs:label "Institution"@en ;
rdfs:comment "An institution; usually holds type material "@en ;
## ----https://openbiodiv.net/TaxonomicDiscovery----------------------------
:TaxonomicDiscovery rdf:type owl:Class ;
rdfs:label "TaxonomicDiscovery"@en ;
rdfs:comment "A taxonomic discovery defined by the mentioning of a holotype in the treatment section "@en ;
## ----https://openbiodiv.net/HolotypeDescription---------------------------
:HolotypeDescription rdf:type owl:Class ;
rdfs:label "HolotypeDescription"@en ;
rdfs:comment "Description of a holotype in a treatment"@en ;
## ----http://rs.tdwg.org/dwc/terms/institutionCode------------------------
:institutionCode rdfs:isDefinedBy <http://rs.tdwg.org/dwc/terms/>;
dcterms:isPartOf <http://rs.tdwg.org/dwc/terms/>;
dcterms:created "2009-04-24"^^xsd:date;
dcterms:modified "2009-09-11"^^xsd:date;
dcterms:replaces <http://rs.tdwg.org/dwc/dwcore/InstitutionCode>;
rdfs:label "Institution Code"@en;
skos:prefLabel "Institution Code"@en;
rdfs:comment "The name (or acronym) in use by the institution having custody of the object(s) or information referred to in the record."@en;
skos:definition "The name (or acronym) in use by the institution having custody of the object(s) or information referred to in the record."@en;
dcterms:description "Examples: \"MVZ\", \"FMNH\", \"AKN-CLO\", \"University of California Museum of Paleontology (UCMP)\""@en;
rdf:type <http://www.w3.org/1999/02/22-rdf-syntax-ns#Property>.
## ----http://rs.tdwg.org/dwc/terms/typeStatus-----------------------------
:typeStatus rdfs:isDefinedBy <http://rs.tdwg.org/dwc/terms/>;
dcterms:isPartOf <http://rs.tdwg.org/dwc/terms/>;
dcterms:created "2009-04-24"^^xsd:date;
dcterms:modified "2014-10-23"^^xsd:date;
dcterms:replaces <http://rs.tdwg.org/dwc/curatorial/TypeStatus>;
rdfs:label "Type Status"@en;
skos:prefLabel "Type Status"@en;
rdfs:comment "A list (concatenated and separated) of nomenclatural types (type status, typified scientific name, publication) applied to the subject."@en;
skos:definition "A list (concatenated and separated) of nomenclatural types (type status, typified scientific name, publication) applied to the subject."@en;
dcterms:description "The recommended best practice is to separate the values with a vertical bar (' | '). Examples: \"holotype of Ctenomys sociabilis. Pearson O. P., and M. I. Christie. 1985. Historia Natural, 5(37):388\", \"holotype of Pinus abies | holotype of Picea abies\"."@en;
rdf:type <http://www.w3.org/1999/02/22-rdf-syntax-ns#Property>.
## ----http://rs.tdwg.org/dwc/terms/verbatimCoordinates--------------------
:verbatimCoordinates rdfns:type owl:Property ;
dctermsns:description "Examples: h41 05 54S 121 05 34W, 17T 630000 4833400"@en ;
rdfsns:comment "The verbatim original spatial coordinates of the Location. The coordinate ellipsoid, geodeticDatum, or full Spatial Reference System (SRS) for these coordinates should be stored in verbatimSRS and the coordinate system should be stored in verbatimCoordinateSystem."@en ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "verbatimCoordinates"@en .
## ----http://rs.tdwg.org/dwc/terms/recordNumber---------------------------
:recordNumber rdfns:type owl:Property ;
dctermsns:description " An identifier given to the Occurrence at the time it was recorded. Often serves as a link between field notes and an Occurrence record, such as a specimen collector's number."@en ;
rdfsns:comment "The subject is a dwc:Occurrence and the object is a (possibly IRI-identified) resource that is the field notes."@en ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "recordNumber"@en .
## ----http://rs.tdwg.org/dwc/terms/recordedBy-----------------------------
:recordedBy rdfns:type owl:Property ;
dctermsns:description "A list (concatenated and separated) of names of people, groups, or organizations responsible for recording the original Occurrence. The primary collector or observer, especially one who applies a personal identifier (recordNumber), should be listed first."@en ;
rdfsns:comment "Recommended best practice is to separate the values in a list with space vertical bar space ( | )."@en ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "recordedBy"@en .
## ----http://rs.tdwg.org/dwc/terms/country--------------------------------
:country rdfns:type owl:Property ;
dctermsns:description "The name of the country or major administrative unit in which the Location occurs."@en ;
rdfsns:comment "Recommended best practice is to use a controlled vocabulary such as the Getty Thesaurus of Geographic Names."@en ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "country"@en .
## ----http://rs.tdwg.org/dwc/terms/stateProvince--------------------------
:stateProvince rdfns:type owl:Property ;
dctermsns:description "The name of the next smaller administrative region than country (state, province, canton, department, region, etc.) in which the Location occurs."@en ;
rdfsns:comment "Recommended best practice is to use a controlled vocabulary such as the Getty Thesaurus of Geographic Names."@en ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "stateProvince"@en .
## ----http://rs.tdwg.org/dwc/terms/locality-------------------------------
:locality rdfns:type owl:Property ;
dctermsns:description "The specific description of the place. Less specific geographic information can be provided in other geographic terms (higherGeography, continent, country, stateProvince, county, municipality, waterBody, island, islandGroup). This term may contain information modified from the original to correct perceived errors or standardize the description."@en ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "locality"@en .
## ----http://rs.tdwg.org/dwc/terms/eventDate------------------------------
:eventDate rdfns:type owl:Property ;
dctermsns:description "The date-time or interval during which an Event occurred. For occurrences, this is the date-time when the event was recorded. Not suitable for a time in a geological context."@en ;
rdfsns:comment "Recommended best practice is to use a date that conforms to ISO 8601:2004(E)."@en ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "eventDate"@en .
## ----http://rs.tdwg.org/dwc/terms/occurrenceID---------------------------
:occurrenceID rdfns:type owl:Property ;
dctermsns:description "An identifier for the Occurrence (as opposed to a particular digital record of the occurrence). In the absence of a persistent global unique identifier, construct one from a combination of identifiers in the record that will most closely make the occurrenceID globally unique."@en ;
rdfsns:comment "Recommended best practice is to use a persistent, globally unique identifier."@en ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "occurrenceID"@en .
## ----http://rs.tdwg.org/dwc/terms/eventID--------------------------------
:eventID rdfns:type owl:Property ;
dctermsns:description "An identifier for the set of information associated with an Event (something that occurs at a place and time). May be a global unique identifier or an identifier specific to the data set."@en ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "eventID"@en .
## ----http://rs.tdwg.org/dwc/terms/identificationID-----------------------
:identificationID rdfns:type owl:Property ;
dctermsns:description "An identifier for the Identification (the body of information associated with the assignment of a scientific name). May be a global unique identifier or an identifier specific to the data set."@en ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "identificationID"@en .
## ----http://rs.tdwg.org/dwc/terms/locationID-----------------------------
:locationID rdfns:type owl:Property ;
dctermsns:description "An identifier for the set of location information (data associated with dcterms:Location). May be a global unique identifier or an identifier specific to the data set."@en ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "locationID"@en .
## ----http://rs.tdwg.org/dwc/terms/catalogNumber--------------------------
:catalogNumber rdfns:type owl:Property ;
dctermsns:description "An identifier (preferably unique) for the record within the data set or collection."@en ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "catalogNumber"@en .
## ----http://rs.tdwg.org/dwc/terms/otherCatalogNumbers--------------------
:otherCatalogNumbers rdfns:type owl:Property ;
dctermsns:description "A list (concatenated and separated) of previous or alternate fully qualified catalog numbers or other human-used identifiers for the same Occurrence, whether in the current or any other data set or collection."@en ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "otherCatalogNumbers"@en .
## ----http://rs.tdwg.org/dwc/terms/individualCount------------------------
:individualCount rdfns:type owl:Property ;
dctermsns:description "The number of individuals represented present at the time of the Occurrence."@en ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "individualCount"@en .
## ----http://rs.tdwg.org/dwc/terms/sex------------------------------------
:sex rdfns:type owl:Property ;
dctermsns:description "The sex of the biological individual(s) represented in the Occurrence."@en ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "sex"@en .
## ----http://rs.tdwg.org/dwc/terms/lifeStage------------------------------
:lifeStage rdfns:type owl:Property ;
dctermsns:description "The age class or life stage of the biological individual(s) at the time the Occurrence was recorded."@en ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "lifeStage"@en .
## ----http://rs.tdwg.org/dwc/terms/verbatimLatitude-----------------------
:verbatimLatitude rdfns:type owl:Property ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "verbatimLatitude"@en .
## ----http://rs.tdwg.org/dwc/terms/verbatimLongitude----------------------
:verbatimLongitude rdfns:type owl:Property ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "verbatimLongitude"@en .
## ----http://rs.tdwg.org/dwc/terms/decimalLongitude-----------------------
:decimalLongitude rdfns:type owl:Property ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "decimalLongitude"@en .
## ----http://rs.tdwg.org/dwc/terms/decimalLatitude------------------------
:decimalLatitude rdfns:type owl:Property ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "decimalLatitude"@en .
## ----http://rs.tdwg.org/dwc/terms/elevation------------------------------
:elevation rdfns:type owl:Property ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "elevation"@en .
## ----http://rs.tdwg.org/dwc/terms/depth----------------------------------
:depth rdfns:type owl:Property ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "depth"@en .
## ----http://rs.tdwg.org/dwc/terms/identifiedBy---------------------------
:identifiedBy rdfns:type owl:Property ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "identifiedBy"@en .
## ----http://rs.tdwg.org/dwc/terms/waterBody------------------------------
:waterBody rdfns:type owl:Property ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "waterBody"@en .
## ----http://rs.tdwg.org/dwc/terms/collectionYear-------------------------
:collectionYear rdfns:type owl:Property ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "collectionYear"@en .
## ----http://rs.tdwg.org/dwc/terms/collectionMonth------------------------
:collectionMonth rdfns:type owl:Property ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "collectionMonth"@en .
## ----http://rs.tdwg.org/dwc/terms/collectionDay--------------------------
:collectionDay rdfns:type owl:Property ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "collectionDay"@en .
## ----http://rs.tdwg.org/dwc/terms/samplingProtocol-----------------------
:samplingProtocol rdfns:type owl:Property ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "samplingProtocol"@en .
## ----http://rs.tdwg.org/dwc/terms/habitat--------------------------------
:habitat rdfns:type owl:Property ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "habitat"@en .
## ----http://rs.tdwg.org/dwc/terms/institutionID--------------------------
:institutionID rdfns:type owl:Property ;
rdfsns:isDefinedBy <http://rs.tdwg.org/dwc/terms/> ;
rdfsns:label "institutionID"@en .
## ----http://rs.tdwg.org/dwc/terms/hasIdentifier--------------------------
:hasIdentifier a owl:ObjectProperty ;
rdfs:label "has identifier"@en ;
rdfs:comment "An object property specifying a datacite:Identifier that provides a unique identifer for the entity (either a funder, a person or a resource)."@en .
## ----https://openbiodiv.net/mentionsIdentifier----------------------------
:mentionsIdentifier rdfs:type rdf:Property ;
rdfs:label "mentionsIdentifier"@en .
## ----https://openbiodiv.net/institutionName-------------------------------
:institutionName rdfs:type rdf:Property ;
rdfs:label "institutionName"@en .
## ----http://purl.org/spar/datacite/usesIdentifierScheme------------------
:usesIdentifierScheme a owl:ObjectProperty ;
rdfs:label "uses identifier scheme"@en ;
rdfs:comment "An object property permitting specification of the identifier scheme used to provide the identifier for an entity – either a funder, a person or a resource – defined as an individual of the class datacite:IdentifierScheme."@en .
## ----https://openbiodiv.net/hasGbifTaxon----------------------------------
:hasGbifTaxon rdfs:type rdf:Property ;
rdfs:label "hasGbifTaxon"@en .
## ----https://openbiodiv.net/hasDownloadLink-------------------------------
:hasDownloadLink rdfs:type rdf:Property ;
rdfs:label "hasDownloadLink"@en .
## ----https://openbiodiv.net/hasBibReferenceID-----------------------------
:hasBibReferenceID rdfs:type rdf:Property ;
rdfs:label "hasBibReferenceID"@en .
## ----https://openbiodiv.net/verbatimAuthor--------------------------------
:verbatimAuthor rdfs:type rdf:Property ;
rdfs:label "verbatimAuthor"@en .
## ----https://openbiodiv.net/verbatimYear----------------------------------
:verbatimYear rdfs:type rdf:Property ;
rdfs:label "verbatimYear"@en .