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makenemo
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makenemo
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#!/bin/bash
#set -x
set -o posix
#set -u
#set -e
#+
#
# ===============
# makenemo
# ===============
#
# --------------------------
# Compile NEMO
# --------------------------
#
# SYNOPSIS
# ========
#
# ::
#
# $ makenemo
#
#
# DESCRIPTION
# ===========
#
#
# This script aims :
#
# - to choose MYCONFIG
# - to choose compiler options
# - to create the CONFIG/MYCONFIG/WORK directory
# - to compile this configuration
#
# Variables used :
#
# From user input
#
# - NEW_CONF : configuration to be created
# - REF_CONF : reference configuration to build the new one from
# - CMP_NAM : compiler name
# - NBR_PRC : number of processes used to compile
# - RMT_CONF : unsupported (external) configuration to build the new one from
# - NEM_SUBDIR : NEMO subdirectory used (specified)
#
# Locally defined :
#
# - TAB : NEMO subdirectory used (read)
# - MAIN_DIR : self explaining
# - CONFIG_DIR : " " "
# - MODELES_DIR : " " "
# - TOOLS_DIR : " " "
# - NEMO_DIR : " " "
# - REMOTE_CTL : URL link to a remote resource list for an external configuration
# which is not part of the reference suite
# - LOCAL_REF : Nearest reference configuration to an external configuration
# which is not part of the reference suite
# (used to populate work directories if remote access is not available)
#
# EXAMPLES
# ========
#
# ::
#
# $ ./makenemo -m ifort_osx - j3 -n ORCA2_SI3_PISCES
#
#
# TODO
# ====
#
# option debug
#
#
# EVOLUTIONS
# ==========
#
# $Id: makenemo 12191 2019-12-11 15:56:06Z jchanut $
#
#
#
# * creation
#
#-
#-
##- Initialization of the options ---
x_d=''; x_h=''; x_n=''; x_r='';
x_u=''; x_a=''; x_m=''; x_t='';
x_c='';
x_j='1'; x_e='none'; x_s='src'; x_v='1'
##- Local variables ---
b_n=$(basename ${0})
OPTIND='1'
MAIN_DIR=$(cd $(dirname "$0"); pwd)
MAIN_DIR=${MAIN_DIR%/sette*}
MAIN_DIR=${MAIN_DIR%/tools*}
MAIN_DIR=${MAIN_DIR%/cfgs*}
export MAIN_DIR
#
export CONFIG_DIR=${MAIN_DIR}/cfgs
export TOOLS_DIR=${MAIN_DIR}/tools
export COMPIL_DIR=${MAIN_DIR}/mk
export NEMO_DIR=${MAIN_DIR}/${x_s}
export AGRIFUSE='10'
list_key='0'; chk_key='1'
list_add_key=''; list_del_key='';
conf_file=ref_cfgs.txt
#-
#- FCM and functions location ---
export PATH=${MAIN_DIR}/ext/FCM/bin:$PATH
#-
#- Choice of the options ---
while getopts :hd:n:r:u:a:m:j:e:s:v:t:k: option; do
case $option in
('h') cat <<EOF
Usage:
------
./makenemo -[aru] CONFIG -m ARCH [-[dehjntv] ...] [{list_key,clean,clean_config}]
[{add_key,del_key} ...]
Mandatory
-m Computing architecture (./arch), FCM file describing the compilation settings
and one of the following option (use 'all' arg to list available items)
-r Reference configuration (./cfgs), proven with long-term support
-a Academic test case (./tests), ready-to-use configuration with no support over time
-u Scripted remote configuration (see ./tests/rmt_cfgs.txt)
Optional
-d New set of sub-components (subfolders from ./src directory)
-e Path for alter patch location (default: 'MY_SRC' in configuration folder)
-h Print this help
-j Number of processes to compile (0: dry run with no build)
-n Name for new configuration
-s Path for alter source location (default: 'src' root directory)
-t Path for alter build location (default: 'BLD' in configuration folder)
-v Level of verbosity ([0-3])
Examples
¤ Configuration creation
Build : ./makenemo -[aru] ... [...]
Copy : ./makenemo -n ... -[aru] ... [...]
¤ Configuration management
List CPP keys : ./makenemo -n ... list_key
Add-Remove keys: ./makenemo -n ... add_key '...' del_key '...'
Fresh start : ./makenemo -n ... clean
Removal : ./makenemo -n ... clean_config
EOF
exit 0 ;;
('d') x_d=${OPTARG};; ('n') x_n=${OPTARG};; ('r') x_r=${OPTARG};; ('u') x_u=${OPTARG};;
('a') x_a=${OPTARG};; ('m') x_m=${OPTARG};; ('j') x_j=${OPTARG};; ('t') x_t=${OPTARG};;
('e') x_e=${OPTARG};; ('s') x_s=${OPTARG};; ('v') x_v=${OPTARG} ;;
('k') chk_key=${OPTARG} ;;
(':') echo ${b_n}" : -"${OPTARG}" option : missing value" 1>&2; exit 2 ;;
('?') echo ${b_n}" : -"${OPTARG}" option : not supported" 1>&2; exit 2 ;;
esac
done
shift $(($OPTIND-1));
## Get clean, clean_config options
while [ ${#1} -gt 0 ]; do
case "$1" in
'clean' ) x_c="--$1" ;;
'clean_config') . ${COMPIL_DIR}/Fclean_config.sh; exit ;;
## Checking if argument has anything other than whitespace
'add_key' ) [[ ! "$2" =~ ^\ +$ ]] && list_add_key=$2; shift;;
'del_key' ) [[ ! "$2" =~ ^\ +$ ]] && list_del_key=$2; shift;;
'list_key' ) list_key='1' ;;
'*' ) echo " \"$1\" BAD OPTION"; exit 2 ;;
esac
shift
done
export NEW_CONF=${x_n}
NBR_PRC=${x_j}
CMP_NAM=${x_m}
NEM_SUBDIR=${x_d}
REF_CONF=${x_r}
DEMO_CONF=${x_a}
RMT_CONF=${x_u}
TML_CONF=${REF_CONF}
export NEMO_DIR=${MAIN_DIR}/${x_s}
[ "${CMP_NAM}" == 'all' ] && . ${COMPIL_DIR}/Flist_archfile.sh all && exit
## No ref. cfg, demo case, nor remote cfg selected
if [[ -z "${REF_CONF}" && -z "${DEMO_CONF}" && -z "${RMT_CONF}" ]]; then
## Reuse last configuration compiled if any (existing 'work_cfgs.txt')
# if [[ $( find ./cfgs ./tests -name work_cfgs.txt ) ]]; then
# CONFIG_DIR=${MAIN_DIR}/$( ls -rt */work_cfgs.txt | awk -F/ 'END{ print $1}' )
# TML_CONF=$( tail -1 ${CONFIG_DIR}/work_cfgs.txt | awk '{ print $1 }' )
# else
## No ${REF_CONF}, ${DEMO_CONF}, ${RMT_CONF} nor ${NEM_SUBDIR} and 1st compilation => exit
# echo -e "\033[0;33m\nNo previous build found!"
echo -e "\033[0;31m\nAt least a reference configuration ('-r'), a test case ('-a'), "
echo -e "a remote configuration ('-u') has to be choosen!!!\033[0m"
${COMPIL_DIR}/Flist_cfgs.sh
exit 2
# fi
## At least one config has been requested
else
## 'all' arg: list all available configurations
if [[ "${REF_CONF}" == 'all' || "${DEMO_CONF}" == 'all' || "${RMT_CONF}" == 'all' ]]; then
${COMPIL_DIR}/Flist_cfgs.sh
exit 2
## Probably useless but who knows?
elif [[ -n "${REF_CONF}" && -n "${DEMO_CONF}" ]]; then
echo -e "\033[0;31m\nYou have to choose whether you work with:"
echo -e " - LTS configurations in ./cfgs ('-r') or"
echo -e " - Unsupported cases in ./tests ('-a')\033[0m\n"
exit 2
fi
## Remote cfg
if [ -n "${RMT_CONF}" ]; then
conf_file=rmt_cfgs.txt; CONFIG_DIR=${MAIN_DIR}/tests;
if [[ ! $( grep ${RMT_CONF} ${CONFIG_DIR}/${conf_file} ) ]]; then
echo -e "\033[0;31m\nThe reference configuration ('-r'), test case ('-a') or "
echo -e "remote configuration ('-u') selected is not available!!!"
echo -e "Check the option used and the available items in .txt files\033[0m"
${COMPIL_DIR}/Flist_cfgs.sh
exit 2
fi
## Little tricky this one
for word in $( grep ${RMT_CONF} ${CONFIG_DIR}/${conf_file} ); do
words[${#words[@]}]=$word
done
TML_CONF=${words[2]}; NEM_SUBDIR=${words[4]}; URL=${words[6]}
## Demo case
elif [ -n "${DEMO_CONF}" ]; then
conf_file=demo_cfgs.txt; CONFIG_DIR=${MAIN_DIR}/tests; TML_CONF=${DEMO_CONF}
fi
fi
## Test if ref. cfg or demo case does exist
if [[ ! $( grep "${TML_CONF} " ${CONFIG_DIR}/*_cfgs.txt ) ]]; then
echo -e "\033[0;31m\nThe reference configuration ('-r'), demonstration case ('-a') or "
echo -e "remote configuration ('-u') selected is not available!!!"
echo -e "Check the option used and the available items in .txt files\033[0m"
${COMPIL_DIR}/Flist_cfgs.sh
exit 2
else
## Reuse a working cfg
if [[ -f ${CONFIG_DIR}/work_cfgs.txt && $( grep "${TML_CONF} " ${CONFIG_DIR}/work_cfgs.txt ) ]]; then
conf_file=work_cfgs.txt
fi
## If new cfg exists, work in it
[ -z "${NEW_CONF}" ] && NEW_CONF=${TML_CONF}
## Update sub-comps if needed
if [ -z "${NEM_SUBDIR}" ]; then
NEM_SUBDIR=$( grep "${TML_CONF} " ${CONFIG_DIR}/${conf_file} | awk '{$1 = ""; print $0}' )
fi
fi
export NEMO_TDIR=${x_t:-$CONFIG_DIR}
## Save new configuration with sub-components set in work_cfgs.txt
[ -f ${CONFIG_DIR}/work_cfgs.txt ] && sed -i "/${NEW_CONF} /d" ${CONFIG_DIR}/work_cfgs.txt
echo ${NEW_CONF} "${NEM_SUBDIR}" \
>> ${CONFIG_DIR}/work_cfgs.txt
cd ${CONFIG_DIR}
printf "\nYou are installing a new configuration %s from %s " ${NEW_CONF} ${TML_CONF}
printf "with sub-components: %s\n" "${NEM_SUBDIR}"
## Create new config even in existing one (mkdir with -p option, cp with -n)
${COMPIL_DIR}/Fmake_config.sh ${NEW_CONF} ${TML_CONF}
## create EXP00 if needed
[ ! -d ${CONFIG_DIR}/${NEW_CONF}/EXP00 ] && \cp -R -n ${CONFIG_DIR}/${NEW_CONF}/EXPREF ${CONFIG_DIR}/${NEW_CONF}/EXP00
## Get online script file for remote cfg
[ -n "${RMT_CONF}" ] && ${COMPIL_DIR}/Ffetch_extdir.sh ${NEW_CONF} $URL
#- Create the WORK ---
#- Clean links and librairies ---
#- Creating the good links, at first on OCE ---
. ${COMPIL_DIR}/Fmake_WORK.sh ${x_e} ${NEW_CONF} ${NEM_SUBDIR} || exit 3
. ${COMPIL_DIR}/Fmake_bld.sh ${CONFIG_DIR} ${NEW_CONF} ${NEMO_TDIR} || exit 3
# build the complete list of the cpp keys of this configuration
if [ ${chk_key} -eq 1 ] ; then
for i in $( grep "^ *#.* key_" ${NEW_CONF}/WORK/* ); do
echo $i | grep key_ | sed -e "s/=.*//"
done \
| sort -d | uniq > ${COMPIL_DIR}/full_key_list.txt
[ ${list_key} -eq 1 ] && cat ${COMPIL_DIR}/full_key_list.txt && exit 0
fi
#- At this stage new configuration has been added, we add or remove keys
[ ! -z "${list_add_key}" ] && { . ${COMPIL_DIR}/Fadd_keys.sh ${NEW_CONF} add_key ${list_add_key}; }
[ ! -z "${list_del_key}" ] && { . ${COMPIL_DIR}/Fdel_keys.sh ${NEW_CONF} del_key ${list_del_key}; }
#- check that all keys are really existing...
if [ $chk_key -eq 1 ] ; then
for kk in $( cat ${NEW_CONF}/cpp_${NEW_CONF}.fcm ); do
if [ "$( echo $kk | cut -c 1-4 )" == "key_" ]; then
kk=${kk/=*/}
if [ ! $( grep $kk ${COMPIL_DIR}/full_key_list.txt ) ]; then
echo
echo "E R R O R : key "$kk" is not found in ${NEW_CONF}/WORK routines..."
echo "we stop..."
echo
exit 1
fi
fi
done
fi
#- At this stage cpp keys have been updated. we can check the arch file
#- When used for the first time, choose a compiler ---
. ${COMPIL_DIR}/Fcheck_archfile.sh arch_nemo.fcm cpp.fcm ${CMP_NAM} || exit 3
#- At this stage the configuration has beeen chosen
#- We coose the default light file
export USEBLD=bldxag.cfg
#- We look after agrif
grep key_agrif ${COMPIL_DIR}/cpp.fcm && export AGRIFUSE=1 && export USEBLD=${USEBLD/xag/}
. ${COMPIL_DIR}/Fprep_agrif.sh ${NEW_CONF} ${NEMO_TDIR} || exit 3
#-
#_ END OF CONFIGURATION PHASE
#_
#-
#- Compile ---
if [ "${NBR_PRC}" -gt 0 ]; then
cd ${NEMO_TDIR}/${NEW_CONF} || cd -
## if AGRIF we do a first preprocessing
if [[ ${#x_c} -eq 0 && "$AGRIFUSE" -eq 1 ]]; then
fcm build --ignore-lock -j 1 ${COMPIL_DIR}/bld_preproagr.cfg ||{ cd - ; exit 1 ;}
echo ''
echo "---------------------------------"
echo "CONV preprocessing successfull !!"
echo "---------------------------------"
echo ''
fi
fcm build ${x_c} --ignore-lock -v ${x_v} -j ${NBR_PRC} ${COMPIL_DIR}/$USEBLD ||{ cd - ; exit 1 ;}
if [ -f ${NEMO_TDIR}/${NEW_CONF}/BLD/bin/nemo.exe ]; then
ln -sf ${NEMO_TDIR}/${NEW_CONF}/BLD/bin/nemo.exe ${CONFIG_DIR}/${NEW_CONF}/EXP00/nemo
fi
## add remove for clean option
if [ ${#x_c} -ne 0 ]; then
echo 'Cleaning in '${NEW_CONF}' the building folders'
for dir in AGRIFLIB BLD EXP00 LONG NEMOFILES REPRO_* SHORT WORK; do
rm -rf ${NEMO_TDIR}/${NEW_CONF}/$dir
done
for file in cpp.history cpp.fcm full_key_list.txt; do
rm -f ${COMPIL_DIR}/$file
done
fi
fi
#- Come back to original directory ---
cd -
#-
#- Unset variables
${COMPIL_DIR}/Fclean_var.sh