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@AllenInstitute

Allen Institute

Please visit http://alleninstitute.github.io/ for more information.

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  1. AllenSDK AllenSDK Public

    code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook 350 150

  2. dipde dipde Public

    Numerical solver for coupled population density equations

    Python 22 14

Repositories

Showing 10 of 408 repositories
  • cell_type_mapper Public

    Repository for storing prototype functionality implementations for the BKP

    AllenInstitute/cell_type_mapper’s past year of commit activity
    Python 19 4 5 2 Updated Jan 8, 2025
  • scrattch.bigcat Public

    iterative clustering pipeline of big single cell datasets.

    AllenInstitute/scrattch.bigcat’s past year of commit activity
    R 27 10 4 0 Updated Jan 8, 2025
  • aibs-informatics-test-resources Public

    Python test utility package

    AllenInstitute/aibs-informatics-test-resources’s past year of commit activity
    Python 1 0 0 1 Updated Jan 8, 2025
  • aibs-informatics-core Public

    Core library to be used as foundation across multiple projects

    AllenInstitute/aibs-informatics-core’s past year of commit activity
    Python 2 0 0 2 Updated Jan 8, 2025
  • visual_behavior_analysis Public

    Python package for analyzing behavioral data for Brain Observatory: Visual Behavior

    AllenInstitute/visual_behavior_analysis’s past year of commit activity
    Jupyter Notebook 23 6 65 6 Updated Jan 8, 2025
  • txtox Public

    Experiments to relate gene expression and anatomical location

    AllenInstitute/txtox’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jan 8, 2025
  • cplAE_MET Public

    Coupled autoencoder extension for MET analysis.

    AllenInstitute/cplAE_MET’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Jan 8, 2025
  • biofile-finder Public

    An open-use web application created for easy access, collaboration, and sharing of datasets through rich metadata search, filter, sort, and direct viewing in common industry applications or in our web-based 3D Volume Viewer.

    AllenInstitute/biofile-finder’s past year of commit activity
    TypeScript 4 BSD-3-Clause 1 56 2 Updated Jan 8, 2025
  • microns_tutorial Public

    MICrONS databook and analysis tutorials

    AllenInstitute/microns_tutorial’s past year of commit activity
    Jupyter Notebook 1 2 0 0 Updated Jan 7, 2025
  • np_notebooks Public
    AllenInstitute/np_notebooks’s past year of commit activity
    Jupyter Notebook 0 3 0 0 Updated Jan 7, 2025
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