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@CDCgov

Centers for Disease Control and Prevention

CDC's collaborative software projects to protect America from health, safety, and security threats, both foreign and in the U.S.
README.md

CDCGov Organization

This is CDC's GitHub organization for collaborating on open source projects. More information on CDC's open collaboration projects is available at openCDC.

Check out our Open Source Practices and please suggest any ideas for improvement by sending a pull request.

Check out a portal of all the projects hosted in the CDCGov domain. (thanks to Tony Boyles)

If you would like to create a new project, please complete this form logging in with your CDC credentials.

If you would like to join the CDCGov organization, or would like to suggest some others to join, please drop an issue into the template repo.

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  1. cdcgov.github.io cdcgov.github.io Public

    Portal site for all CDCgov projects, https://cdcgov.github.io

    HTML 20 16

  2. template template Public template

    Template repository with rules, practices, and privacy, license, records notices to help people use the CDCgov GitHub organization.

    34 42

Repositories

Showing 10 of 418 repositories
  • pyrenew-hew Public

    Models and infrastructure for forecasting COVID-19 and Flu hospitalizations using wastewater data with PyRenew

    CDCgov/pyrenew-hew’s past year of commit activity
    Python 5 Apache-2.0 1 46 5 Updated Jan 4, 2025
  • data-exchange-processing-status Public

    The Public Health Data Observability (PHDO) Processing Status API (PS API) was developed to provide visibility into the status and performance of file uploads. The PS API provides the ability to receive reports about the status of uploads, and to develop custom queries to ask detailed questions about the data being uploaded and processed.

    CDCgov/data-exchange-processing-status’s past year of commit activity
    Kotlin 2 Apache-2.0 1 1 2 Updated Jan 4, 2025
  • phoenix Public

    🔥🐦🔥PHoeNIx: a platform agnostic pipeline for healthcare-associated and antimicrobial resistant pathogens

    CDCgov/phoenix’s past year of commit activity
    Python 61 Apache-2.0 19 10 1 Updated Jan 4, 2025
  • prime-reportstream Public

    ReportStream is a public intermediary tool for delivery of data between different parts of the healthcare ecosystem.

    CDCgov/prime-reportstream’s past year of commit activity
    Kotlin 74 CC0-1.0 41 1,233 131 Updated Jan 4, 2025
  • dibbs-query-connector Public

    A FHIR client allowing public health agencies to query health care organizations directly or via a TEFCA QHIN

    CDCgov/dibbs-query-connector’s past year of commit activity
    TypeScript 4 CC0-1.0 1 39 4 Updated Jan 4, 2025
  • trusted-intermediary Public

    Bringing together healthcare providers by reducing the connection burden.

    CDCgov/trusted-intermediary’s past year of commit activity
    Groovy 11 Apache-2.0 6 154 3 Updated Jan 4, 2025
  • tostadas Public

    🧬 💻 TOSTADAS → Toolkit for Open Sequence Triage, Annotation and DAtabase Submission

    CDCgov/tostadas’s past year of commit activity
    Python 27 Apache-2.0 9 18 0 Updated Jan 3, 2025
  • eMKF Public
    CDCgov/eMKF’s past year of commit activity
    SAS 2 Apache-2.0 2 0 0 Updated Jan 3, 2025
  • DynODE Public

    CDC/CFA/Predict/Scenarios ODE Modeling Framework

    CDCgov/DynODE’s past year of commit activity
    Python 5 Apache-2.0 1 31 (3 issues need help) 2 Updated Jan 3, 2025
  • Opioid_SUD_MHI_MedCodes Public

    Code to flag ICD-10-CM codes related to opioid involvement, substance use disorder, and mental health issues in structured hospital data

    CDCgov/Opioid_SUD_MHI_MedCodes’s past year of commit activity
    Python 6 3 0 0 Updated Jan 3, 2025
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