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Welcome to 2001! :-)
Not much to say... I created a CMake compilation system, which is basically emulating your Makefile. There are some features pending (like Doxygen doc generation), but I would say is a good starting point
I tested it a bit, but more testing is obviously welcomed! You can do that typing:
The important variables are
GPUSPH_PROBLEM
,GPUSPH_USE_MPI
,GPUSPH_USE_HDF5
andGPUSPH_USE_CHRONO