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Update NEWS, fix typos #1209

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16 changes: 8 additions & 8 deletions NEWS
Original file line number Diff line number Diff line change
Expand Up @@ -89,7 +89,7 @@ CHANGES in VERSION 2.9.3
* discrete annotations: neighbour grids are merged into one single grid if they have the
same values.
* `anno_barplot()`: allows to add numbers on top of bars.
* `UpSet()`: axis labels are automatically formated for genomic coordinates.
* `UpSet()`: axis labels are automatically formatted for genomic coordinates.
* `AnnotationFunction()`: add a new argument `cell_fun`.
* When the dendrogram height is zero, the corresponding viewport has scale (0, 1).

Expand Down Expand Up @@ -170,7 +170,7 @@ CHANGES in VERSION 2.7.1
* `Legend()`: add `interval_dist` to control the distance of two neighbouring breaks.
* Fixed a bug that it crashes Rstudio
* `make_comb_mat()`: print warning messages when there are NA values in the matrix.
* temporary solution for woking under retina display with Rstudio
* temporary solution for working under retina display with Rstudio
* add `bin_genome()` and `normalize_genomic_signals_to_bins()`
* print messages if directly sending `anno_*()` functions to `top_annotation` or similar arguments.
* `pheatmap()`: set heatmap name to " " so that there is no legend title by default.
Expand Down Expand Up @@ -279,7 +279,7 @@ CHANGES in VERSION 2.3.3
* print important messages, e.g. when number of rows are more than 2000, interanlly use_raster
is turned on and the message should be printed to users.
* UpSet plots: optimize the processing of many sets (current solution consumes huge memory)
* UpSet plots: the "intersect" and "union" modes are currectly calculated.
* UpSet plots: the "intersect" and "union" modes are correctly calculated.
* `anno_block()`: add `show_name` argument.

========================
Expand Down Expand Up @@ -487,18 +487,18 @@ CHANGES in VERSION 1.11.7

CHANGES in VERSION 1.11.6

* simply bump the verison number
* simply bump the version number
* `gap` in `Heatmap()` now can be a vector

===========================

CHANGES in VERSION 1.11.5

* `gap` in `HeatmapAnnotation` has been adjusted
* annotations support drawing names of either sides
* annotations support drawing names of either side
* `densityHeatmap()`: quantile lines are also reordered
* export `anno_oncoprint_barplot`
* `Heatmap()`: if `col` is a unnamed vector and the number of colors is same as
* `Heatmap()`: if `col` is an unnamed vector and the number of colors is same as
unique itemes in `mat`, the name of `col` vector is set to `sort(unique(mat))
* adjusted the order of annotation legends
* discreat legend: if a level is not in the data while defined by `col`, it will
Expand Down Expand Up @@ -537,7 +537,7 @@ CHANGES in VERSION 1.9.5
* add a section in the vignette to show how to adjust positions
of column names when there are bottom annotations.
* fixed a bug that character NA values can not to assigned with na_col
* extra character 'at' and 'labels' in legends will be removed automatically
* extra characters 'at' and 'labels' in legends will be removed automatically
* all arguments which are passed to `make_layout()` are all explicitly put
in `draw()` instead of using ...

Expand Down Expand Up @@ -647,7 +647,7 @@ CHANGES in VERSION 1.4.1

CHANGES in VERSION 1.4.0

* returned value for `draw` method has been changes
* returned value for `draw` method has been changed
* add `row_order`, `column_order`, `row_dend` and `column_dend`
to extract orders and dendrograms after heatmap clustering
* add `select` function to interactively select sub region in the heatmap
Expand Down