Switched to RxNorm db for rxnconso #11
Workflow file for this run
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name: CI | |
on: | |
pull_request: | |
paths-ignore: | |
- 'docs/**' | |
push: | |
branches: | |
- main | |
paths-ignore: | |
- 'docs/**' | |
jobs: | |
unittest: | |
name: unit tests | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: '3.11' | |
cache: pip | |
- name: Get library from main | |
run: pip install git+https://github.com/smart-on-fhir/cumulus-library.git | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip | |
pip install ".[test]" | |
- name: Create mock AWS credentials | |
run: | | |
mkdir ~/.aws && touch ~/.aws/credentials | |
echo -e "[test]\naws_access_key_id = test\naws_secret_access_key = test" > ~/.aws/credentials | |
- name: Test with pytest | |
run: | | |
python -m pytest tests |